Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1459

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
1,722,649	+		Rru_A1458	0.60	+0.9
1,722,654	+		Rru_A1458	0.60	+0.4
1,722,654	+		Rru_A1458	0.60	+1.3
1,722,654	+		Rru_A1458	0.60	+0.4
1,722,654	+		Rru_A1458	0.60	+0.4
1,722,654	+		Rru_A1458	0.60	-0.1
1,722,655	-		Rru_A1458	0.60	+0.0
1,722,655	-		Rru_A1458	0.60	+0.1
1,722,655	-		Rru_A1458	0.60	+0.1
1,722,655	-		Rru_A1458	0.60	+0.9
1,722,655	-		Rru_A1458	0.60	-0.1
1,722,666	+		Rru_A1458	0.60	+0.1
1,722,666	+		Rru_A1458	0.60	+0.4
1,722,667	-		Rru_A1458	0.60	+0.8
1,722,667	-		Rru_A1458	0.60	-0.1
1,722,682	-		Rru_A1458	0.61	-0.1
1,722,682	-		Rru_A1458	0.61	-1.3
1,722,696	+		Rru_A1458	0.62	+0.4
1,722,696	+		Rru_A1458	0.62	-0.1
1,722,696	+		Rru_A1458	0.62	+0.1
1,722,697	-		Rru_A1458	0.62	-0.1
1,722,933	+		Rru_A1458	0.73	+0.0
1,722,933	+		Rru_A1458	0.73	+0.3
1,722,933	+		Rru_A1458	0.73	-0.1
1,722,934	-		Rru_A1458	0.73	+0.4
1,722,934	-		Rru_A1458	0.73	-2.4
1,722,934	-		Rru_A1458	0.73	-0.2
1,722,934	-		Rru_A1458	0.73	+0.2
1,723,175	+		Rru_A1458	0.85	+0.7
1,723,175	+		Rru_A1458	0.85	+0.3
1,723,175	+		Rru_A1458	0.85	+0.1
1,723,176	-		Rru_A1458	0.85	+1.6
1,723,176	-		Rru_A1458	0.85	+0.9
1,723,176	-		Rru_A1458	0.85	-1.1
1,723,524	+				-0.3
1,723,524	+				-0.1
1,723,524	+				+0.9
1,723,525	-				+0.9
1,724,048	-		Rru_A1459	0.43	-1.1
1,724,081	+		Rru_A1459	0.46	+0.1
1,724,081	+		Rru_A1459	0.46	+0.2
1,724,082	-		Rru_A1459	0.46	-0.1
1,724,082	-		Rru_A1459	0.46	-0.1
1,724,370	-		Rru_A1459	0.68	+0.5
1,724,389	-		Rru_A1459	0.70	+2.1
1,724,389	-		Rru_A1459	0.70	-0.1
1,724,389	-		Rru_A1459	0.70	+1.4
1,724,389	-		Rru_A1459	0.70	-1.1
1,724,892	-				-0.1
1,724,901	+				+0.7
1,724,902	-				-0.1
1,724,922	-				+1.2
1,725,167	-				-0.1
1,725,172	-				-0.1
1,725,211	+				-0.1
1,725,633	-		Rru_A1460	0.23	-0.1
1,725,752	+		Rru_A1460	0.29	-0.1
1,725,752	+		Rru_A1460	0.29	+0.5
1,725,752	+		Rru_A1460	0.29	+0.4
1,725,753	-		Rru_A1460	0.29	+0.4
1,725,753	-		Rru_A1460	0.29	+0.3