Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1445

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
1,709,313	+		Rru_A1444	0.76	-0.1
1,709,314	-		Rru_A1444	0.76	+0.4
1,709,571	+		Rru_A1444	0.90	-0.1
1,709,571	+		Rru_A1444	0.90	+0.4
1,709,571	+		Rru_A1444	0.90	+0.7
1,709,571	+		Rru_A1444	0.90	-1.1
1,709,571	+		Rru_A1444	0.90	+0.4
1,709,572	-		Rru_A1444	0.90	+0.3
1,709,572	-		Rru_A1444	0.90	+0.9
1,709,572	-		Rru_A1444	0.90	-0.1
1,709,649	+				-0.1
1,709,649	+				+0.9
1,709,650	-				+0.3
1,709,650	-				-0.1
1,709,652	+				+1.0
1,709,652	+				+0.4
1,709,653	-				-0.8
1,709,653	-				-0.1
1,709,653	-				-0.1
1,709,653	-				-0.2
1,709,653	-				-0.1
1,709,740	-				+0.1
1,709,752	+				-0.1
1,709,763	+				+0.6
1,709,764	-				+0.8
1,709,764	-				-0.1
1,709,852	+				-0.5
1,709,867	+				+0.4
1,709,868	-				+0.6
1,709,879	+				+0.2
1,709,879	+				+0.3
1,709,880	-				+0.1
1,709,880	-				+0.7
1,709,880	-				-0.1
1,709,880	-				-0.1
1,710,060	-		Rru_A1445	0.26	+0.8
1,710,060	-		Rru_A1445	0.26	-0.4
1,710,060	-		Rru_A1445	0.26	-0.2
1,710,061	+		Rru_A1445	0.26	-0.4
1,710,062	-		Rru_A1445	0.26	-0.1
1,710,062	-		Rru_A1445	0.26	+0.4
1,710,062	-		Rru_A1445	0.26	+0.4
1,710,130	+		Rru_A1445	0.33	-0.1
1,710,140	+		Rru_A1445	0.34	+0.1
1,710,140	+		Rru_A1445	0.34	+0.6
1,710,140	+		Rru_A1445	0.34	+0.8
1,710,140	+		Rru_A1445	0.34	-0.3
1,710,140	+		Rru_A1445	0.34	-0.1
1,710,141	-		Rru_A1445	0.34	-0.1
1,710,141	-		Rru_A1445	0.34	+0.8
1,710,141	-		Rru_A1445	0.34	+0.3
1,710,200	+		Rru_A1445	0.39	+0.1
1,710,201	-		Rru_A1445	0.39	-0.1
1,710,227	+		Rru_A1445	0.42	+0.1
1,710,227	+		Rru_A1445	0.42	-0.7
1,710,228	-		Rru_A1445	0.42	+0.5
1,710,421	+		Rru_A1445	0.60	+0.2
1,710,602	+		Rru_A1445	0.77	-0.1
1,710,602	+		Rru_A1445	0.77	+0.5
1,710,647	+		Rru_A1445	0.81	+1.3
1,710,647	+		Rru_A1445	0.81	-1.1
1,710,647	+		Rru_A1445	0.81	+0.2
1,710,677	+		Rru_A1445	0.84	+0.3
1,710,770	+				-0.1
1,711,014	-				-0.1
1,711,030	+				+0.9
1,711,030	+				-0.1
1,711,031	-				-0.1
1,711,034	+		Rru_A1446	0.10	-0.1
1,711,034	+		Rru_A1446	0.10	+0.6
1,711,035	-		Rru_A1446	0.10	-0.1
1,711,035	-		Rru_A1446	0.10	-0.1
1,711,037	+		Rru_A1446	0.11	-0.0
1,711,313	+		Rru_A1446	0.66	+1.0
1,711,313	+		Rru_A1446	0.66	+1.0
1,711,313	+		Rru_A1446	0.66	+1.3
1,711,314	-		Rru_A1446	0.66	+0.1
1,711,798	+		Rru_A1447	0.10	+0.6
1,711,798	+		Rru_A1447	0.10	+0.1
1,711,798	+		Rru_A1447	0.10	+0.8
1,711,799	-		Rru_A1447	0.11	-1.1
1,711,799	-		Rru_A1447	0.11	+0.9