Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1443

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
1,705,400	+				+1.1
1,705,400	+				+0.8
1,705,401	-				+1.2
1,705,401	-				+1.0
1,705,401	-				+1.3
1,705,401	-				+0.9
1,705,491	-		Rru_A1441	0.18	-0.1
1,705,744	+		Rru_A1441	0.75	-0.1
1,705,744	+		Rru_A1441	0.75	-0.4
1,705,820	+				-0.1
1,705,821	-				-1.4
1,705,822	+				-3.2
1,705,823	-				-0.1
1,705,823	-				-1.1
1,705,823	-				-0.1
1,705,823	-				-0.1
1,706,091	+		Rru_A1442	0.35	+0.8
1,706,091	+		Rru_A1442	0.35	+0.7
1,706,091	+		Rru_A1442	0.35	+0.4
1,706,092	-		Rru_A1442	0.35	+0.3
1,706,092	-		Rru_A1442	0.35	-0.1
1,706,271	-		Rru_A1442	0.72	-0.1
1,706,422	+				+0.5
1,706,567	-		Rru_A1443	0.18	-0.1
1,706,604	+		Rru_A1443	0.21	-0.1
1,706,605	-		Rru_A1443	0.22	-0.1
1,706,605	-		Rru_A1443	0.22	-0.1
1,706,700	+		Rru_A1443	0.31	+0.0
1,706,707	+		Rru_A1443	0.32	+0.4
1,706,724	+		Rru_A1443	0.34	-0.1
1,706,775	+		Rru_A1443	0.39	+2.3
1,706,776	-		Rru_A1443	0.39	+0.3
1,706,898	+		Rru_A1443	0.52	+0.7
1,706,898	+		Rru_A1443	0.52	-0.1
1,706,899	-		Rru_A1443	0.52	-0.1
1,707,012	+		Rru_A1443	0.64	-0.8
1,707,012	+		Rru_A1443	0.64	-0.1
1,707,013	-		Rru_A1443	0.64	-0.1
1,707,013	-		Rru_A1443	0.64	-0.1
1,707,013	-		Rru_A1443	0.64	+0.5
1,707,096	+		Rru_A1443	0.73	+0.1
1,707,096	+		Rru_A1443	0.73	-0.9
1,707,102	+		Rru_A1443	0.73	-0.1
1,707,102	+		Rru_A1443	0.73	+0.3
1,707,102	+		Rru_A1443	0.73	+0.2
1,707,102	+		Rru_A1443	0.73	+0.3
1,707,279	-				+0.1
1,707,279	-				+0.8
1,707,296	-				-1.1
1,707,322	+				-0.1
1,707,323	-				-0.1
1,707,433	+				+0.2
1,707,585	-				-1.3
1,708,065	+		Rru_A1444	0.10	+1.5
1,708,065	+		Rru_A1444	0.10	+0.4
1,708,065	+		Rru_A1444	0.10	+0.5
1,708,332	+		Rru_A1444	0.24	-0.2
1,708,332	+		Rru_A1444	0.24	-0.1
1,708,332	+		Rru_A1444	0.24	+0.9
1,708,333	-		Rru_A1444	0.24	-1.1
1,708,333	-		Rru_A1444	0.24	-0.5