Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1439

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
1,701,034	-				-0.1
1,701,159	+				+1.0
1,701,159	+				-0.5
1,701,160	-				+2.1
1,701,160	-				-0.1
1,701,160	-				+1.2
1,701,163	-				+0.8
1,701,163	-				-0.1
1,701,163	-				-1.1
1,701,182	+		Rru_A1438	0.14	+0.4
1,701,182	+		Rru_A1438	0.14	-0.1
1,701,182	+		Rru_A1438	0.14	-0.1
1,701,183	-		Rru_A1438	0.14	+1.3
1,701,183	-		Rru_A1438	0.14	+1.5
1,701,288	+		Rru_A1438	0.34	-0.1
1,701,289	-		Rru_A1438	0.34	+1.7
1,701,289	-		Rru_A1438	0.34	-0.1
1,701,294	+		Rru_A1438	0.35	-1.1
1,701,383	+		Rru_A1438	0.52	-0.1
1,701,384	-		Rru_A1438	0.52	-0.1
1,701,384	-		Rru_A1438	0.52	-0.1
1,701,498	+		Rru_A1438	0.74	-0.1
1,701,499	-		Rru_A1438	0.74	-0.1
1,702,137	-		Rru_A1439	0.44	-0.1
1,702,489	-		Rru_A1439	0.79	-2.1
1,702,894	+				-1.3
1,703,064	+				+0.7
1,703,065	-				-0.1
1,703,065	-				-0.1
1,703,065	-				-0.1
1,703,091	-		Rru_A1440	0.11	+0.4
1,703,116	-		Rru_A1440	0.12	-0.1
1,703,116	-		Rru_A1440	0.12	-1.1
1,703,302	-		Rru_A1440	0.19	-0.1
1,703,302	-		Rru_A1440	0.19	+0.6
1,703,553	+		Rru_A1440	0.29	+0.7
1,703,554	-		Rru_A1440	0.29	+0.3
1,703,589	+		Rru_A1440	0.31	-0.1
1,703,590	-		Rru_A1440	0.31	-0.3
1,703,590	-		Rru_A1440	0.31	+0.7
1,703,590	-		Rru_A1440	0.31	+0.1