Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1410

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
1,664,986	+		Rru_A1409	0.47	-0.1
1,664,986	+		Rru_A1409	0.47	+1.4
1,664,986	+		Rru_A1409	0.47	+0.1
1,664,986	+		Rru_A1409	0.47	-0.1
1,664,987	-		Rru_A1409	0.47	+0.7
1,665,035	+		Rru_A1409	0.50	-0.7
1,665,035	+		Rru_A1409	0.50	+0.6
1,665,035	+		Rru_A1409	0.50	-0.1
1,665,036	-		Rru_A1409	0.50	-0.1
1,665,052	+		Rru_A1409	0.51	-0.5
1,665,052	+		Rru_A1409	0.51	-0.1
1,665,053	-		Rru_A1409	0.51	+0.3
1,665,053	-		Rru_A1409	0.51	+0.1
1,665,124	+		Rru_A1409	0.56	+0.0
1,665,124	+		Rru_A1409	0.56	+2.2
1,665,124	+		Rru_A1409	0.56	+0.8
1,665,124	+		Rru_A1409	0.56	-0.1
1,665,125	-		Rru_A1409	0.56	+2.3
1,665,125	-		Rru_A1409	0.56	-0.1
1,665,125	-		Rru_A1409	0.56	-0.1
1,665,125	-		Rru_A1409	0.56	-0.2
1,665,294	-		Rru_A1409	0.66	+2.2
1,665,363	-		Rru_A1409	0.70	+0.5
1,665,391	+		Rru_A1409	0.72	+1.5
1,665,507	+		Rru_A1409	0.79	-0.4
1,665,508	-		Rru_A1409	0.79	-0.1
1,665,581	+		Rru_A1409	0.83	+0.7
1,665,582	-		Rru_A1409	0.83	-0.1
1,665,582	-		Rru_A1409	0.83	-1.6
1,665,582	-		Rru_A1409	0.83	-0.1
1,665,583	+		Rru_A1409	0.83	-0.1
1,665,584	-		Rru_A1409	0.84	+0.4
1,665,584	-		Rru_A1409	0.84	-0.1
1,665,682	+		Rru_A1409	0.89	-0.1
1,665,682	+		Rru_A1409	0.89	+1.1
1,665,746	+				-0.1
1,666,037	+				-0.1
1,666,037	+				+1.1
1,666,038	-				-1.3
1,666,038	-				-0.4
1,666,514	+		Rru_A1410	0.21	-0.1
1,666,514	+		Rru_A1410	0.21	-0.1
1,666,515	-		Rru_A1410	0.21	-0.1
1,666,628	+		Rru_A1410	0.25	-0.1
1,666,629	-		Rru_A1410	0.25	-0.1
1,666,629	-		Rru_A1410	0.25	-0.6
1,666,977	+		Rru_A1410	0.37	-0.1
1,666,977	+		Rru_A1410	0.37	-0.1
1,666,978	-		Rru_A1410	0.37	-0.1
1,666,978	-		Rru_A1410	0.37	-0.1
1,666,991	+		Rru_A1410	0.38	+0.9
1,666,992	-		Rru_A1410	0.38	-1.1
1,666,992	-		Rru_A1410	0.38	+0.1
1,667,279	+		Rru_A1410	0.48	+0.6
1,667,279	+		Rru_A1410	0.48	+0.1
1,667,280	-		Rru_A1410	0.48	+0.3
1,667,280	-		Rru_A1410	0.48	+1.9
1,667,319	+		Rru_A1410	0.49	+0.6
1,667,319	+		Rru_A1410	0.49	-0.1
1,667,319	+		Rru_A1410	0.49	+0.2
1,667,320	-		Rru_A1410	0.49	-2.1
1,667,360	+		Rru_A1410	0.51	+0.6
1,667,361	-		Rru_A1410	0.51	-0.1
1,667,361	-		Rru_A1410	0.51	-0.1
1,667,361	-		Rru_A1410	0.51	-1.4
1,667,361	-		Rru_A1410	0.51	+0.7
1,667,730	+		Rru_A1410	0.64	-0.5
1,668,059	+		Rru_A1410	0.75	+0.6
1,668,083	+		Rru_A1410	0.76	+0.7
1,668,084	-		Rru_A1410	0.76	+0.9
1,668,108	-		Rru_A1410	0.77	-0.1
1,668,284	+		Rru_A1410	0.83	+0.8
1,668,355	-		Rru_A1410	0.85	+0.1
1,668,572	+				+0.3
1,668,573	-				+1.6
1,668,650	+				+0.7
1,668,671	+				-0.1
1,668,749	+				+0.6
1,668,827	-				+0.0
1,669,124	-		Rru_A1411	0.52	-2.4
1,669,124	-		Rru_A1411	0.52	-0.1
1,669,204	+		Rru_A1411	0.64	+0.6
1,669,205	-		Rru_A1411	0.64	-0.1
1,669,205	-		Rru_A1411	0.64	+0.5
1,669,205	-		Rru_A1411	0.64	-0.1
1,669,205	-		Rru_A1411	0.64	-0.1
1,669,205	-		Rru_A1411	0.64	-0.1
1,669,205	-		Rru_A1411	0.64	+1.2
1,669,279	+		Rru_A1411	0.75	-0.4
1,669,454	+				-0.1
1,669,454	+				-0.1
1,669,596	-		Rru_A1412	0.11	-1.1
1,669,596	-		Rru_A1412	0.11	-0.1