Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1399

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
1,649,872	-				-0.1
1,650,029	-				+0.0
1,650,163	+				-0.3
1,650,584	+		Rru_A1398	0.22	-0.3
1,650,584	+		Rru_A1398	0.22	-0.1
1,650,584	+		Rru_A1398	0.22	-0.1
1,650,584	+		Rru_A1398	0.22	+0.2
1,650,585	-		Rru_A1398	0.23	-1.1
1,650,585	-		Rru_A1398	0.23	-1.9
1,650,585	-		Rru_A1398	0.23	-0.1
1,650,585	-		Rru_A1398	0.23	-0.1
1,650,665	+		Rru_A1398	0.44	-0.1
1,650,668	+		Rru_A1398	0.45	+0.4
1,650,668	+		Rru_A1398	0.45	+0.2
1,650,668	+		Rru_A1398	0.45	-0.1
1,650,669	-		Rru_A1398	0.45	-0.2
1,650,669	-		Rru_A1398	0.45	-0.1
1,650,669	-		Rru_A1398	0.45	+0.5
1,650,723	+		Rru_A1398	0.60	+0.5
1,650,723	+		Rru_A1398	0.60	+0.2
1,650,723	+		Rru_A1398	0.60	+0.1
1,650,723	+		Rru_A1398	0.60	+0.3
1,650,723	+		Rru_A1398	0.60	+0.3
1,650,723	+		Rru_A1398	0.60	-0.1
1,650,723	+		Rru_A1398	0.60	-0.1
1,650,723	+		Rru_A1398	0.60	+0.4
1,650,723	+		Rru_A1398	0.60	-0.1
1,650,723	+		Rru_A1398	0.60	+0.2
1,650,723	+		Rru_A1398	0.60	-0.1
1,650,724	-		Rru_A1398	0.60	+0.5
1,650,724	-		Rru_A1398	0.60	-0.1
1,650,724	-		Rru_A1398	0.60	-0.1
1,650,724	-		Rru_A1398	0.60	-0.1
1,650,724	-		Rru_A1398	0.60	+0.5
1,650,725	+		Rru_A1398	0.60	+0.3
1,650,855	-				+0.6
1,650,855	-				-0.1
1,651,007	-				+0.6
1,651,007	-				+0.2
1,651,007	-				+0.8
1,651,007	-				-0.1
1,651,007	-				+0.3
1,651,007	-				-0.2
1,651,675	+		Rru_A1399	0.39	+0.5
1,651,675	+		Rru_A1399	0.39	-0.1
1,651,675	+		Rru_A1399	0.39	+0.4
1,652,077	+		Rru_A1399	0.58	+0.5
1,652,077	+		Rru_A1399	0.58	+1.1
1,652,077	+		Rru_A1399	0.58	-0.0
1,652,561	+		Rru_A1399	0.81	+0.2
1,652,562	-		Rru_A1399	0.81	+0.4
1,652,562	-		Rru_A1399	0.81	+0.2
1,652,562	-		Rru_A1399	0.81	-0.0
1,652,562	-		Rru_A1399	0.81	-0.0
1,652,648	-		Rru_A1399	0.85	+0.7
1,652,648	-		Rru_A1399	0.85	+0.4
1,652,921	+				-0.1
1,652,922	-				-0.1
1,652,922	-				-0.5
1,653,205	+		Rru_A1400	0.37	+0.8
1,653,206	-		Rru_A1400	0.37	-0.1
1,653,206	-		Rru_A1400	0.37	+0.9
1,653,206	-		Rru_A1400	0.37	-0.2
1,653,322	-		Rru_A1400	0.60	-1.6
1,653,393	+		Rru_A1400	0.74	-0.2
1,653,393	+		Rru_A1400	0.74	-0.1
1,653,394	-		Rru_A1400	0.74	-1.6
1,653,538	+				-0.1
1,653,538	+				+0.1