Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1361

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
1,600,809	+		Rru_A1359	0.39	-1.0
1,600,811	+		Rru_A1359	0.40	-0.0
1,600,956	-		Rru_A1359	0.70	+0.3
1,601,000	+		Rru_A1359	0.79	-0.0
1,601,000	+		Rru_A1359	0.79	-0.0
1,601,001	-		Rru_A1359	0.80	-0.6
1,601,001	-		Rru_A1359	0.80	+2.3
1,601,077	-				-0.0
1,601,111	+				-0.0
1,601,111	+				-0.0
1,601,111	+				-0.0
1,601,609	-		Rru_A1360	0.75	+0.4
1,601,781	+				+0.3
1,601,788	+				+0.1
1,601,788	+				+1.1
1,601,789	-				-0.0
1,601,964	+		Rru_A1361	0.18	-1.2
1,601,965	-		Rru_A1361	0.18	-0.0
1,601,965	-		Rru_A1361	0.18	-0.0
1,601,965	-		Rru_A1361	0.18	+0.7
1,602,052	+		Rru_A1361	0.27	+0.7
1,602,052	+		Rru_A1361	0.27	+0.2
1,602,053	-		Rru_A1361	0.27	+0.5
1,602,442	+		Rru_A1361	0.66	+0.3
1,602,443	-		Rru_A1361	0.66	-0.2
1,602,443	-		Rru_A1361	0.66	-1.0
1,602,443	-		Rru_A1361	0.66	-0.0
1,602,456	+		Rru_A1361	0.67	+0.3
1,602,457	-		Rru_A1361	0.68	+1.1
1,602,465	+		Rru_A1361	0.68	-0.0
1,602,465	+		Rru_A1361	0.68	+0.3
1,602,465	+		Rru_A1361	0.68	+0.9
1,602,465	+		Rru_A1361	0.68	-0.0
1,602,466	-		Rru_A1361	0.68	+0.1
1,602,466	-		Rru_A1361	0.68	-0.0
1,602,471	+		Rru_A1361	0.69	-0.6
1,602,472	-		Rru_A1361	0.69	-0.2
1,602,472	-		Rru_A1361	0.69	-0.4
1,602,585	+		Rru_A1361	0.80	-0.0
1,602,675	+		Rru_A1361	0.89	+0.7
1,602,676	-		Rru_A1361	0.89	-1.2
1,602,676	-		Rru_A1361	0.89	-0.0
1,602,676	-		Rru_A1361	0.89	+0.4
1,602,676	-		Rru_A1361	0.89	+0.2
1,602,676	-		Rru_A1361	0.89	+0.4
1,602,904	+				-0.0
1,602,943	+		Rru_A1362	0.14	+1.2
1,602,943	+		Rru_A1362	0.14	+0.7
1,602,943	+		Rru_A1362	0.14	+0.3
1,602,944	-		Rru_A1362	0.14	+0.4
1,602,944	-		Rru_A1362	0.14	+0.4
1,603,043	-		Rru_A1362	0.25	+0.4
1,603,243	+		Rru_A1362	0.47	-0.0
1,603,243	+		Rru_A1362	0.47	+0.3
1,603,243	+		Rru_A1362	0.47	-0.0
1,603,243	+		Rru_A1362	0.47	+1.2
1,603,244	-		Rru_A1362	0.48	-0.0
1,603,274	-		Rru_A1362	0.51	-0.6
1,603,312	+		Rru_A1362	0.55	-0.0
1,603,432	+		Rru_A1362	0.69	+0.4
1,603,477	+		Rru_A1362	0.74	-0.0
1,603,477	+		Rru_A1362	0.74	-0.3
1,603,477	+		Rru_A1362	0.74	-0.0
1,603,478	-		Rru_A1362	0.74	-0.0
1,603,478	-		Rru_A1362	0.74	+0.5
1,603,478	-		Rru_A1362	0.74	-0.0
1,603,481	+		Rru_A1362	0.74	-0.0
1,603,482	-		Rru_A1362	0.74	+0.3
1,603,482	-		Rru_A1362	0.74	-0.0
1,603,483	+		Rru_A1362	0.74	+0.2
1,603,483	+		Rru_A1362	0.74	+0.2
1,603,484	-		Rru_A1362	0.74	+0.4
1,603,484	-		Rru_A1362	0.74	+0.6
1,603,603	+		Rru_A1362	0.88	-0.0
1,603,603	+		Rru_A1362	0.88	+0.4
1,603,603	+		Rru_A1362	0.88	+0.2
1,603,603	+		Rru_A1362	0.88	-0.0
1,603,603	+		Rru_A1362	0.88	+1.8
1,603,603	+		Rru_A1362	0.88	+1.0
1,603,603	+		Rru_A1362	0.88	+0.6
1,603,603	+		Rru_A1362	0.88	-1.0
1,603,603	+		Rru_A1362	0.88	-0.0
1,603,604	-		Rru_A1362	0.88	+0.4
1,603,604	-		Rru_A1362	0.88	+0.4
1,603,604	-		Rru_A1362	0.88	+0.0
1,603,604	-		Rru_A1362	0.88	-0.0
1,603,604	-		Rru_A1362	0.88	-0.0
1,603,609	+		Rru_A1362	0.88	-0.0
1,603,609	+		Rru_A1362	0.88	-0.4
1,603,609	+		Rru_A1362	0.88	+0.5
1,603,610	-		Rru_A1362	0.88	+0.5
1,603,610	-		Rru_A1362	0.88	+0.3
1,603,610	-		Rru_A1362	0.88	-0.0
1,603,610	-		Rru_A1362	0.88	+0.1
1,603,618	+		Rru_A1362	0.89	-0.0
1,603,619	-		Rru_A1362	0.89	-0.0
1,603,741	+				+0.1
1,603,741	+				-0.0
1,603,741	+				+1.5
1,603,741	+				+0.6
1,603,741	+				-0.0
1,603,742	-				+0.4
1,603,742	-				-0.0
1,603,742	-				+0.4
1,603,742	-				-0.0
1,603,742	-				-0.0