Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1355

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
1,594,607	+		Rru_A1353	0.40	-0.0
1,594,608	-		Rru_A1353	0.41	-0.0
1,594,763	+		Rru_A1353	0.71	-0.0
1,594,764	-		Rru_A1353	0.71	+0.8
1,594,791	+		Rru_A1353	0.76	+0.6
1,594,791	+		Rru_A1353	0.76	+0.3
1,594,791	+		Rru_A1353	0.76	+0.5
1,594,792	-		Rru_A1353	0.77	-0.0
1,594,792	-		Rru_A1353	0.77	+0.7
1,594,908	+				+1.0
1,594,908	+				+1.0
1,594,909	-				+0.3
1,595,245	-		Rru_A1354	0.49	+0.4
1,595,449	-				-1.1
1,595,560	+				-0.1
1,595,560	+				+0.5
1,595,561	-				-0.1
1,595,692	+		Rru_A1355	0.32	-0.1
1,595,692	+		Rru_A1355	0.32	-0.1
1,595,692	+		Rru_A1355	0.32	-0.1
1,595,693	-		Rru_A1355	0.32	-0.1
1,595,693	-		Rru_A1355	0.32	-0.1
1,595,693	-		Rru_A1355	0.32	-0.1
1,595,693	-		Rru_A1355	0.32	-0.1
1,595,693	-		Rru_A1355	0.32	+0.9
1,595,693	-		Rru_A1355	0.32	-0.1
1,595,693	-		Rru_A1355	0.32	+0.8
1,595,693	-		Rru_A1355	0.32	-0.1
1,595,693	-		Rru_A1355	0.32	+1.7
1,596,204	+				+0.7
1,596,469	-		Rru_A1356	0.13	+0.4
1,596,469	-		Rru_A1356	0.13	+0.5
1,596,937	-		Rru_A1356	0.35	+0.2