Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1349

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
1,588,349	+				-0.0
1,588,627	+		Rru_A1348	0.35	-0.0
1,588,628	-		Rru_A1348	0.35	-0.3
1,588,990	-		Rru_A1348	0.78	-0.0
1,589,204	+				-0.6
1,589,209	+				+0.1
1,589,210	-				-0.0
1,589,639	+		Rru_A1349	0.26	-0.0
1,589,837	+		Rru_A1349	0.39	-1.0
1,589,838	-		Rru_A1349	0.39	-1.0
1,589,838	-		Rru_A1349	0.39	+0.1
1,589,838	-		Rru_A1349	0.39	+0.9
1,589,838	-		Rru_A1349	0.39	-1.0
1,589,871	-		Rru_A1349	0.41	+2.0
1,589,896	+		Rru_A1349	0.43	+1.2
1,589,936	+		Rru_A1349	0.45	-0.0
1,589,936	+		Rru_A1349	0.45	+0.6
1,589,960	+		Rru_A1349	0.47	+0.6
1,589,960	+		Rru_A1349	0.47	-0.2
1,589,960	+		Rru_A1349	0.47	-0.0
1,589,961	-		Rru_A1349	0.47	-1.0
1,589,961	-		Rru_A1349	0.47	+0.1
1,589,961	-		Rru_A1349	0.47	+0.5
1,589,961	-		Rru_A1349	0.47	+1.0
1,589,961	-		Rru_A1349	0.47	+0.5
1,590,028	+		Rru_A1349	0.51	-0.0
1,590,111	-		Rru_A1349	0.56	-0.0
1,590,113	+		Rru_A1349	0.56	-0.0
1,590,113	+		Rru_A1349	0.56	+0.3
1,590,114	-		Rru_A1349	0.56	+0.6
1,590,273	-		Rru_A1349	0.66	+1.0
1,590,273	-		Rru_A1349	0.66	-1.0
1,590,273	-		Rru_A1349	0.66	-0.0
1,590,803	+				-0.0
1,590,804	-				-0.0
1,590,804	-				+0.4
1,590,804	-				-0.0
1,590,804	-				-0.0
1,590,914	+				-0.0
1,590,914	+				+0.3
1,590,914	+				-0.0
1,590,914	+				-0.0
1,590,915	-				+0.6
1,590,915	-				+0.7
1,590,915	-				+1.0
1,590,915	-				-0.0
1,590,915	-				-0.0
1,590,915	-				-0.0
1,590,916	+				-0.0
1,590,916	+				+1.2
1,590,916	+				-0.0
1,590,916	+				-0.0
1,590,917	-				+0.3
1,590,917	-				-0.0
1,590,917	-				+0.1
1,590,917	-				-0.0
1,590,917	-				+1.4
1,590,917	-				-0.0
1,591,279	-		Rru_A1350	0.30	-0.0
1,591,489	-		Rru_A1350	0.47	-1.0
1,591,489	-		Rru_A1350	0.47	-0.0
1,591,499	-		Rru_A1350	0.48	-1.7
1,591,499	-		Rru_A1350	0.48	-0.0
1,591,644	-		Rru_A1350	0.59	+1.0
1,591,734	-		Rru_A1350	0.66	+0.3
1,591,734	-		Rru_A1350	0.66	+1.3
1,591,734	-		Rru_A1350	0.66	+0.1