Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1344

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
1,582,982	+		Rru_A1343	0.49	+0.5
1,583,199	-		Rru_A1343	0.63	+1.5
1,583,199	-		Rru_A1343	0.63	+0.2
1,583,243	+		Rru_A1343	0.66	+0.7
1,583,243	+		Rru_A1343	0.66	-0.0
1,583,244	-		Rru_A1343	0.66	+0.8
1,583,244	-		Rru_A1343	0.66	+0.0
1,583,424	-		Rru_A1343	0.78	-0.0
1,583,672	+				-0.0
1,583,672	+				+0.7
1,583,673	-				+0.9
1,583,673	-				-2.6
1,583,796	+				+1.4
1,583,821	+				+0.6
1,583,831	-				+0.3
1,584,041	+		Rru_A1344	0.18	-0.0
1,584,042	-		Rru_A1344	0.18	+0.2
1,584,042	-		Rru_A1344	0.18	-0.4
1,584,078	-		Rru_A1344	0.23	-1.0
1,584,087	+		Rru_A1344	0.24	+0.3
1,584,157	-		Rru_A1344	0.33	-0.2
1,584,157	-		Rru_A1344	0.33	+0.3
1,584,267	+		Rru_A1344	0.47	-1.0
1,584,267	+		Rru_A1344	0.47	-1.0
1,584,267	+		Rru_A1344	0.47	-0.0
1,584,835	+				-0.0
1,584,835	+				+0.5
1,584,835	+				+0.9
1,584,835	+				+0.6
1,584,836	-				-0.0
1,584,836	-				-0.0
1,584,836	-				+3.2
1,584,836	-				-0.2
1,584,836	-				+0.2
1,584,836	-				-0.0
1,585,025	+		Rru_A1345	0.23	+0.9
1,585,025	+		Rru_A1345	0.23	-0.0
1,585,025	+		Rru_A1345	0.23	-0.0
1,585,025	+		Rru_A1345	0.23	-0.0
1,585,025	+		Rru_A1345	0.23	-0.0
1,585,025	+		Rru_A1345	0.23	+0.1
1,585,026	-		Rru_A1345	0.23	+0.2
1,585,026	-		Rru_A1345	0.23	-0.7
1,585,026	-		Rru_A1345	0.23	+0.4
1,585,115	+		Rru_A1345	0.34	-0.0
1,585,115	+		Rru_A1345	0.34	-0.0
1,585,116	-		Rru_A1345	0.34	-0.2
1,585,190	+		Rru_A1345	0.42	+0.3
1,585,190	+		Rru_A1345	0.42	-0.0
1,585,191	-		Rru_A1345	0.43	+0.5
1,585,288	+		Rru_A1345	0.54	+0.2
1,585,288	+		Rru_A1345	0.54	+0.4
1,585,288	+		Rru_A1345	0.54	-0.1
1,585,288	+		Rru_A1345	0.54	+2.1
1,585,288	+		Rru_A1345	0.54	-0.2
1,585,288	+		Rru_A1345	0.54	-0.0
1,585,288	+		Rru_A1345	0.54	+0.4
1,585,288	+		Rru_A1345	0.54	-0.0
1,585,289	-		Rru_A1345	0.54	+1.7
1,585,289	-		Rru_A1345	0.54	-0.6