Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1319

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
1,556,415	+				-1.0
1,556,416	-				+0.5
1,556,461	+				+0.9
1,556,462	-				-0.0
1,556,462	-				-2.4
1,556,540	+		Rru_A1318	0.20	+1.2
1,556,541	-		Rru_A1318	0.20	+0.1
1,556,541	-		Rru_A1318	0.20	+0.9
1,556,541	-		Rru_A1318	0.20	-0.0
1,556,575	+		Rru_A1318	0.29	+1.0
1,556,604	+		Rru_A1318	0.35	-1.0
1,556,604	+		Rru_A1318	0.35	-0.3
1,556,604	+		Rru_A1318	0.35	+0.8
1,556,605	-		Rru_A1318	0.36	+0.4
1,556,605	-		Rru_A1318	0.36	-0.0
1,556,866	+				-0.0
1,556,867	-				+0.3
1,556,867	-				+0.6
1,556,867	-				-0.0
1,556,978	+				-0.4
1,556,978	+				-0.0
1,556,978	+				-0.3
1,556,978	+				-0.0
1,556,979	-				+0.3
1,556,994	+				-0.3
1,557,048	-				+0.2
1,557,689	-		Rru_A1319	0.33	-0.0
1,557,727	-		Rru_A1319	0.37	-0.0
1,557,927	+		Rru_A1319	0.58	-3.0
1,558,225	-				-0.3
1,558,225	-				-0.0
1,558,382	+				-0.3
1,558,393	+				-2.7
1,558,394	-				+0.3
1,558,397	+				-0.0
1,558,397	+				-0.0
1,558,614	+				-0.4
1,558,615	-				-0.0
1,558,615	-				-0.0
1,558,625	+		Rru_A1320	0.10	-1.0
1,558,625	+		Rru_A1320	0.10	-0.4
1,558,626	-		Rru_A1320	0.10	-0.0
1,558,626	-		Rru_A1320	0.10	+1.3
1,558,769	+		Rru_A1320	0.22	-1.0
1,558,769	+		Rru_A1320	0.22	+0.2
1,558,770	-		Rru_A1320	0.22	+0.4
1,558,800	+		Rru_A1320	0.25	-0.0
1,558,801	-		Rru_A1320	0.25	+1.5
1,558,801	-		Rru_A1320	0.25	-0.0
1,558,956	+		Rru_A1320	0.37	-0.4
1,558,957	-		Rru_A1320	0.37	+0.7
1,558,959	+		Rru_A1320	0.38	-0.0
1,558,959	+		Rru_A1320	0.38	-0.0
1,558,959	+		Rru_A1320	0.38	-0.0
1,558,959	+		Rru_A1320	0.38	-0.0
1,558,959	+		Rru_A1320	0.38	-1.0
1,558,960	-		Rru_A1320	0.38	-0.0
1,558,960	-		Rru_A1320	0.38	+0.8
1,558,960	-		Rru_A1320	0.38	+1.0
1,558,960	-		Rru_A1320	0.38	+0.4
1,558,960	-		Rru_A1320	0.38	-0.0
1,558,960	-		Rru_A1320	0.38	-0.0
1,559,085	+		Rru_A1320	0.48	-0.1
1,559,085	+		Rru_A1320	0.48	-0.0
1,559,086	-		Rru_A1320	0.48	-0.0
1,559,086	-		Rru_A1320	0.48	+0.3
1,559,086	-		Rru_A1320	0.48	-0.0
1,559,091	+		Rru_A1320	0.49	+0.3
1,559,091	+		Rru_A1320	0.49	-0.8
1,559,106	+		Rru_A1320	0.50	-2.6
1,559,107	-		Rru_A1320	0.50	+0.6
1,559,121	+		Rru_A1320	0.51	-0.0
1,559,151	+		Rru_A1320	0.53	-0.0
1,559,151	+		Rru_A1320	0.53	-0.0
1,559,151	+		Rru_A1320	0.53	+0.3