Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1317

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
1,553,798	-		Rru_A1316	0.73	-0.0
1,553,798	-		Rru_A1316	0.73	-0.0
1,554,203	-				+0.7
1,554,203	-				-0.0
1,554,203	-				+1.0
1,554,243	+				+0.2
1,554,244	-				-0.0
1,554,251	+				+0.5
1,554,252	-				-1.0
1,554,262	-				-0.8
1,554,669	+		Rru_A1317	0.20	+0.7
1,554,669	+		Rru_A1317	0.20	-0.0
1,554,669	+		Rru_A1317	0.20	-2.2
1,554,669	+		Rru_A1317	0.20	+0.3
1,554,669	+		Rru_A1317	0.20	-0.0
1,554,670	-		Rru_A1317	0.20	+0.7
1,554,670	-		Rru_A1317	0.20	-0.0
1,554,670	-		Rru_A1317	0.20	-0.0
1,554,670	-		Rru_A1317	0.20	+0.2
1,554,670	-		Rru_A1317	0.20	-0.0
1,554,670	-		Rru_A1317	0.20	+0.9
1,554,670	-		Rru_A1317	0.20	-0.0
1,554,670	-		Rru_A1317	0.20	+0.3
1,554,670	-		Rru_A1317	0.20	-0.0
1,554,768	+		Rru_A1317	0.26	+1.0
1,554,769	-		Rru_A1317	0.26	-0.0
1,554,769	-		Rru_A1317	0.26	-0.0
1,554,769	-		Rru_A1317	0.26	+0.9
1,554,966	+		Rru_A1317	0.38	-0.0
1,554,967	-		Rru_A1317	0.38	-0.8
1,554,967	-		Rru_A1317	0.38	+0.8
1,555,061	+		Rru_A1317	0.44	+1.1
1,555,061	+		Rru_A1317	0.44	-0.0
1,555,065	+		Rru_A1317	0.44	+3.1
1,555,065	+		Rru_A1317	0.44	+0.9
1,555,065	+		Rru_A1317	0.44	-0.0
1,555,065	+		Rru_A1317	0.44	+1.0
1,555,065	+		Rru_A1317	0.44	+0.9
1,555,066	-		Rru_A1317	0.44	-0.0
1,555,066	-		Rru_A1317	0.44	+1.4
1,555,066	-		Rru_A1317	0.44	+0.4
1,555,084	-		Rru_A1317	0.45	+0.3
1,555,084	-		Rru_A1317	0.45	+0.8
1,555,084	-		Rru_A1317	0.45	-0.0
1,555,116	+		Rru_A1317	0.47	-0.0
1,555,117	-		Rru_A1317	0.47	+0.4
1,555,117	-		Rru_A1317	0.47	+0.6
1,555,134	+		Rru_A1317	0.49	-0.0
1,555,146	+		Rru_A1317	0.49	+0.6
1,555,147	-		Rru_A1317	0.49	+0.8
1,555,230	+		Rru_A1317	0.54	-0.0
1,555,230	+		Rru_A1317	0.54	-0.0
1,555,431	+		Rru_A1317	0.67	-0.0
1,555,639	-		Rru_A1317	0.80	+1.3
1,555,686	+		Rru_A1317	0.82	+0.6
1,555,686	+		Rru_A1317	0.82	+0.4
1,555,686	+		Rru_A1317	0.82	+0.3
1,555,686	+		Rru_A1317	0.82	-0.0
1,555,687	-		Rru_A1317	0.83	+0.7
1,555,687	-		Rru_A1317	0.83	+0.8
1,555,687	-		Rru_A1317	0.83	+0.4
1,555,687	-		Rru_A1317	0.83	-0.0
1,555,797	+		Rru_A1317	0.89	+0.9
1,555,798	-		Rru_A1317	0.89	-0.0
1,555,815	+				-0.0
1,555,957	-				+0.3
1,555,957	-				-0.0
1,556,149	-				-0.5
1,556,415	+				-1.0
1,556,416	-				+0.5
1,556,461	+				+0.9
1,556,462	-				-0.0
1,556,462	-				-2.4
1,556,540	+		Rru_A1318	0.20	+1.2
1,556,541	-		Rru_A1318	0.20	+0.1
1,556,541	-		Rru_A1318	0.20	+0.9
1,556,541	-		Rru_A1318	0.20	-0.0
1,556,575	+		Rru_A1318	0.29	+1.0
1,556,604	+		Rru_A1318	0.35	-1.0
1,556,604	+		Rru_A1318	0.35	-0.3
1,556,604	+		Rru_A1318	0.35	+0.8
1,556,605	-		Rru_A1318	0.36	+0.4
1,556,605	-		Rru_A1318	0.36	-0.0
1,556,866	+				-0.0
1,556,867	-				+0.3
1,556,867	-				+0.6
1,556,867	-				-0.0