Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1282

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
1,509,047	+		Rru_A1280	0.77	+0.2
1,509,047	+		Rru_A1280	0.77	+0.3
1,509,047	+		Rru_A1280	0.77	+0.4
1,509,047	+		Rru_A1280	0.77	+1.3
1,509,048	-		Rru_A1280	0.77	+1.7
1,509,048	-		Rru_A1280	0.77	+0.3
1,509,121	+		Rru_A1280	0.84	-0.2
1,509,121	+		Rru_A1280	0.84	+0.3
1,509,271	+				-0.0
1,509,272	-				-0.0
1,509,298	+				+1.4
1,509,311	+				+0.2
1,509,312	-				+0.1
1,509,342	+				+0.1
1,509,451	+		Rru_A1281	0.35	-2.0
1,509,521	+		Rru_A1281	0.60	-0.0
1,509,521	+		Rru_A1281	0.60	-0.0
1,509,521	+		Rru_A1281	0.60	+0.2
1,509,522	-		Rru_A1281	0.61	-0.1
1,509,544	+		Rru_A1281	0.68	+1.4
1,509,544	+		Rru_A1281	0.68	+0.5
1,509,544	+		Rru_A1281	0.68	+2.0
1,509,545	-		Rru_A1281	0.69	-1.0
1,509,545	-		Rru_A1281	0.69	+0.7
1,509,545	-		Rru_A1281	0.69	-0.0
1,509,576	+		Rru_A1281	0.80	+1.0
1,509,576	+		Rru_A1281	0.80	-0.0
1,509,578	-		Rru_A1281	0.81	-0.0
1,509,604	-				-0.2
1,509,617	+				+1.8
1,509,617	+				+0.6
1,509,617	+				+0.9
1,509,617	+				-0.0
1,509,780	+				-1.0
1,509,781	-				-0.0
1,509,781	-				+0.1
1,509,906	+		Rru_A1282	0.26	-0.0
1,509,906	+		Rru_A1282	0.26	+0.7
1,509,906	+		Rru_A1282	0.26	+0.3
1,509,907	-		Rru_A1282	0.26	-0.0
1,509,907	-		Rru_A1282	0.26	+0.8
1,509,907	-		Rru_A1282	0.26	-0.0
1,510,161	+		Rru_A1282	0.60	+0.6
1,510,161	+		Rru_A1282	0.60	-0.0
1,510,161	+		Rru_A1282	0.60	+1.0
1,510,162	-		Rru_A1282	0.60	-1.0
1,510,162	-		Rru_A1282	0.60	+0.6
1,510,162	-		Rru_A1282	0.60	-0.0
1,510,349	-		Rru_A1282	0.85	+0.5
1,510,377	+		Rru_A1282	0.89	+0.7
1,510,434	-				-0.0
1,510,498	-				+0.6
1,510,518	+				+1.5
1,510,518	+				+1.0
1,510,525	+				+0.4
1,510,526	-				-0.6
1,510,570	+				-0.0
1,510,653	+				+0.8
1,510,654	-				-1.3
1,510,654	-				-1.0
1,510,690	+				-0.0
1,510,690	+				-0.3
1,510,697	+				+0.1
1,510,697	+				+0.7
1,510,717	+				+0.2
1,510,717	+				-0.0
1,510,718	-				-0.0
1,510,718	-				-0.0
1,510,718	-				-0.0
1,510,718	-				-0.8
1,510,839	-		Rru_A1283	0.12	-0.0
1,510,850	+		Rru_A1283	0.13	+0.1
1,510,863	-		Rru_A1283	0.15	+0.5
1,510,878	+		Rru_A1283	0.16	+0.2
1,510,878	+		Rru_A1283	0.16	-0.0
1,510,878	+		Rru_A1283	0.16	+0.1
1,510,879	-		Rru_A1283	0.16	-2.6
1,510,879	-		Rru_A1283	0.16	-0.0
1,510,879	-		Rru_A1283	0.16	-1.0
1,510,896	+		Rru_A1283	0.17	-0.0
1,510,898	+		Rru_A1283	0.17	+0.3
1,510,898	+		Rru_A1283	0.17	-0.0
1,510,898	+		Rru_A1283	0.17	-0.4
1,510,898	+		Rru_A1283	0.17	-0.0
1,510,898	+		Rru_A1283	0.17	-0.0
1,510,898	+		Rru_A1283	0.17	+1.0
1,510,898	+		Rru_A1283	0.17	+1.1
1,510,966	-		Rru_A1283	0.23	+0.1
1,510,966	-		Rru_A1283	0.23	-0.0
1,510,966	-		Rru_A1283	0.23	-0.0
1,510,999	-		Rru_A1283	0.26	-1.3
1,511,124	+		Rru_A1283	0.37	-0.0
1,511,243	+		Rru_A1283	0.47	-0.1
1,511,333	+		Rru_A1283	0.54	-0.6