Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1272

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
1,494,860	-		Rru_A1271	0.55	+1.3
1,494,860	-		Rru_A1271	0.55	+0.4
1,494,860	-		Rru_A1271	0.55	+0.9
1,494,860	-		Rru_A1271	0.55	-0.0
1,494,866	-		Rru_A1271	0.55	+0.9
1,494,866	-		Rru_A1271	0.55	+0.4
1,494,866	-		Rru_A1271	0.55	-0.0
1,494,866	-		Rru_A1271	0.55	-0.0
1,494,905	-		Rru_A1271	0.58	+0.7
1,495,246	+		Rru_A1271	0.86	-1.0
1,495,246	+		Rru_A1271	0.86	-0.0
1,495,246	+		Rru_A1271	0.86	+0.4
1,495,597	+				-0.0
1,495,598	-				-1.0
1,495,785	-				-0.0
1,495,785	-				-0.0
1,495,785	-				-0.0
1,495,786	+				-0.0
1,495,787	-				-0.0
1,495,787	-				+0.0
1,495,787	-				+0.2
1,495,811	+				-0.0
1,495,915	+				+0.7
1,495,915	+				+2.5
1,495,915	+				+0.8
1,495,916	-				+0.1
1,495,921	-				+0.9
1,496,084	-		Rru_A1272	0.18	+0.4
1,496,117	+		Rru_A1272	0.20	-0.0
1,496,117	+		Rru_A1272	0.20	+0.2
1,496,118	-		Rru_A1272	0.20	-0.8
1,496,188	+		Rru_A1272	0.24	+0.2
1,496,453	+		Rru_A1272	0.38	-0.0
1,496,454	-		Rru_A1272	0.38	-0.4
1,496,454	-		Rru_A1272	0.38	-0.0
1,496,502	-		Rru_A1272	0.40	+0.6
1,496,630	+		Rru_A1272	0.47	+0.5
1,496,631	-		Rru_A1272	0.47	+0.2
1,496,631	-		Rru_A1272	0.47	+0.5
1,496,655	+		Rru_A1272	0.48	+1.0
1,496,835	+		Rru_A1272	0.58	-1.6
1,496,836	-		Rru_A1272	0.58	+0.3
1,496,836	-		Rru_A1272	0.58	-0.5
1,496,836	-		Rru_A1272	0.58	-0.0
1,496,836	-		Rru_A1272	0.58	+0.0
1,496,836	-		Rru_A1272	0.58	-0.0
1,496,844	-		Rru_A1272	0.58	-0.0
1,496,878	+		Rru_A1272	0.60	-0.8
1,496,878	+		Rru_A1272	0.60	-0.0
1,496,879	-		Rru_A1272	0.60	-0.0
1,496,879	-		Rru_A1272	0.60	+0.7
1,496,897	+		Rru_A1272	0.61	-0.0
1,496,898	-		Rru_A1272	0.61	-0.0
1,497,177	+		Rru_A1272	0.76	-0.0
1,497,177	+		Rru_A1272	0.76	+1.0
1,497,177	+		Rru_A1272	0.76	+0.9
1,497,178	-		Rru_A1272	0.76	+0.2
1,497,178	-		Rru_A1272	0.76	+0.4
1,497,259	+		Rru_A1272	0.80	-0.0
1,497,259	+		Rru_A1272	0.80	-0.0
1,497,260	-		Rru_A1272	0.80	-0.0
1,497,260	-		Rru_A1272	0.80	-0.0
1,497,263	+		Rru_A1272	0.80	+0.9
1,497,263	+		Rru_A1272	0.80	-0.0
1,497,263	+		Rru_A1272	0.80	-0.0
1,497,263	+		Rru_A1272	0.80	-0.2
1,497,263	+		Rru_A1272	0.80	+0.8
1,497,263	+		Rru_A1272	0.80	-0.6
1,497,264	-		Rru_A1272	0.80	+0.2
1,497,264	-		Rru_A1272	0.80	-0.0
1,497,264	-		Rru_A1272	0.80	+0.3
1,497,264	-		Rru_A1272	0.80	+0.6
1,497,429	+		Rru_A1272	0.89	-0.0
1,497,430	-		Rru_A1272	0.89	-0.0
1,497,430	-		Rru_A1272	0.89	-0.1
1,497,563	+				+1.6
1,497,563	+				+0.3
1,497,563	+				+0.1
1,497,563	+				-0.1
1,497,564	-				+0.1
1,497,564	-				-0.0
1,497,882	+		Rru_A1273	0.28	+0.8
1,497,984	+		Rru_A1273	0.41	-0.4
1,497,984	+		Rru_A1273	0.41	-0.2
1,497,985	-		Rru_A1273	0.42	-0.0
1,498,512	+				+0.1
1,498,512	+				+0.8
1,498,513	-				+0.8