Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1265
Experiment: acetate; Light intensity 9 uM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | acetate; Light intensity 9 uM |
---|---|---|---|---|---|
remove | |||||
1,485,292 | + | -1.0 | |||
1,485,293 | - | +0.1 | |||
1,485,427 | + | Rru_A1264 | 0.17 | -0.0 | |
1,485,427 | + | Rru_A1264 | 0.17 | +0.5 | |
1,485,428 | - | Rru_A1264 | 0.17 | -0.0 | |
1,485,428 | - | Rru_A1264 | 0.17 | +3.0 | |
1,485,428 | - | Rru_A1264 | 0.17 | -0.0 | |
1,485,428 | - | Rru_A1264 | 0.17 | +0.3 | |
1,485,607 | + | Rru_A1264 | 0.40 | -0.0 | |
1,485,985 | + | Rru_A1264 | 0.89 | +0.3 | |
1,485,986 | - | Rru_A1264 | 0.89 | +0.4 | |
1,486,606 | + | Rru_A1265 | 0.40 | -0.6 | |
1,486,748 | - | Rru_A1265 | 0.56 | -0.0 | |
1,486,882 | + | Rru_A1265 | 0.72 | -1.6 | |
1,487,004 | + | Rru_A1265 | 0.86 | -3.6 |
Or see this region's nucleotide sequence