Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1260

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
1,480,316	+		Rru_A1258	0.64	-0.2
1,480,433	+		Rru_A1258	0.80	-0.0
1,480,844	+				-0.0
1,480,844	+				+0.4
1,480,845	-				-0.0
1,480,845	-				+0.6
1,480,845	-				+0.5
1,480,987	+				-0.0
1,480,987	+				+0.6
1,480,988	-				-0.0
1,480,988	-				+0.6
1,480,988	-				-0.0
1,480,988	-				-0.0
1,480,988	-				+0.5
1,481,030	+				-0.0
1,481,030	+				-0.0
1,481,031	-				-0.0
1,481,031	-				+0.7
1,481,264	+		Rru_A1260	0.27	-0.0
1,481,264	+		Rru_A1260	0.27	+1.3
1,481,264	+		Rru_A1260	0.27	+1.1
1,481,264	+		Rru_A1260	0.27	-0.0
1,481,264	+		Rru_A1260	0.27	-0.0
1,481,265	-		Rru_A1260	0.27	-0.0
1,481,265	-		Rru_A1260	0.27	-0.1
1,481,265	-		Rru_A1260	0.27	-0.7
1,481,811	+		Rru_A1260	0.76	+0.7
1,481,811	+		Rru_A1260	0.76	-0.0
1,481,819	+		Rru_A1260	0.76	+0.1
1,481,819	+		Rru_A1260	0.76	+0.2
1,481,820	-		Rru_A1260	0.77	-1.0
1,481,820	-		Rru_A1260	0.77	+0.6
1,481,828	+		Rru_A1260	0.77	-0.2
1,481,829	-		Rru_A1260	0.77	-0.0
1,481,829	-		Rru_A1260	0.77	-0.4
1,482,044	+				+0.3
1,482,070	+				-0.0
1,482,070	+				+0.7
1,482,070	+				-0.0
1,482,070	+				-0.0
1,482,070	+				-1.0
1,482,070	+				-0.0
1,482,070	+				+0.6
1,482,071	-				+0.1
1,482,196	-				+0.6
1,482,283	-		Rru_A1261	0.13	+0.6
1,482,291	+		Rru_A1261	0.14	-0.0
1,482,291	+		Rru_A1261	0.14	-1.0
1,482,292	-		Rru_A1261	0.14	+0.7
1,482,292	-		Rru_A1261	0.14	-0.0
1,482,339	+		Rru_A1261	0.19	-0.0
1,482,340	-		Rru_A1261	0.19	-0.3
1,482,340	-		Rru_A1261	0.19	-0.0
1,482,352	-		Rru_A1261	0.21	+0.2
1,482,352	-		Rru_A1261	0.21	-0.0
1,482,352	-		Rru_A1261	0.21	-0.0
1,482,352	-		Rru_A1261	0.21	-0.0
1,482,474	+		Rru_A1261	0.34	+0.1
1,482,474	+		Rru_A1261	0.34	+1.3
1,482,475	-		Rru_A1261	0.34	+0.2
1,482,475	-		Rru_A1261	0.34	+0.8
1,482,475	-		Rru_A1261	0.34	-0.0
1,482,544	+		Rru_A1261	0.42	+1.1
1,482,545	-		Rru_A1261	0.42	-0.0
1,482,627	+		Rru_A1261	0.51	+0.8
1,482,627	+		Rru_A1261	0.51	+0.7
1,482,627	+		Rru_A1261	0.51	+1.2
1,482,628	-		Rru_A1261	0.51	+0.6
1,482,707	+		Rru_A1261	0.60	+0.4
1,482,720	+		Rru_A1261	0.62	-0.0
1,482,721	-		Rru_A1261	0.62	-0.0
1,482,723	+		Rru_A1261	0.62	-0.0
1,482,723	+		Rru_A1261	0.62	+1.0
1,482,723	+		Rru_A1261	0.62	-1.0
1,482,723	+		Rru_A1261	0.62	+0.5
1,482,724	-		Rru_A1261	0.62	-0.0
1,482,867	+		Rru_A1261	0.78	-0.0
1,482,867	+		Rru_A1261	0.78	+0.5
1,482,871	+		Rru_A1261	0.78	+1.5
1,482,871	+		Rru_A1261	0.78	+0.6
1,482,872	-		Rru_A1261	0.79	-1.5
1,482,872	-		Rru_A1261	0.79	-0.1
1,482,894	+		Rru_A1261	0.81	-0.0
1,482,895	-		Rru_A1261	0.81	-0.5
1,482,976	+				+0.6
1,482,976	+				-0.0
1,482,976	+				+0.0
1,482,976	+				+1.9
1,482,977	-				-0.0
1,482,977	-				+1.0
1,482,977	-				-0.0
1,482,977	-				-1.6