Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1219

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
1,437,917	-				-0.6
1,437,917	-				-0.0
1,437,917	-				-0.5
1,437,917	-				-0.3
1,437,917	-				+0.3
1,438,155	+		Rru_A1218	0.19	-0.0
1,438,155	+		Rru_A1218	0.19	-0.5
1,438,259	+		Rru_A1218	0.34	-1.3
1,438,260	-		Rru_A1218	0.34	-0.0
1,438,886	-				-1.3
1,439,045	+		Rru_A1219	0.15	+0.7
1,439,045	+		Rru_A1219	0.15	-0.9
1,439,045	+		Rru_A1219	0.15	-1.4
1,439,045	+		Rru_A1219	0.15	-0.9
1,439,045	+		Rru_A1219	0.15	-1.4
1,439,046	-		Rru_A1219	0.15	-1.5
1,439,046	-		Rru_A1219	0.15	-0.0
1,439,046	-		Rru_A1219	0.15	-0.0
1,439,046	-		Rru_A1219	0.15	-0.0
1,439,587	+		Rru_A1219	0.68	-0.5
1,439,588	-		Rru_A1219	0.68	-2.8
1,439,588	-		Rru_A1219	0.68	-0.0
1,439,769	-		Rru_A1219	0.86	-0.5
1,439,784	+		Rru_A1219	0.88	-0.0
1,439,785	-		Rru_A1219	0.88	-0.7
1,439,785	-		Rru_A1219	0.88	-0.0
1,439,906	+				-0.0