Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1207

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
1,423,481	+				-0.0
1,423,481	+				-0.0
1,423,482	-				+1.8
1,423,515	+				+1.3
1,423,515	+				+0.9
1,423,949	-		Rru_A1206	0.75	+1.3
1,424,141	+				+1.6
1,424,142	-				+0.5
1,424,142	-				+1.0
1,424,205	+				+0.6
1,424,205	+				-0.0
1,424,205	+				+0.3
1,424,205	+				-0.0
1,424,310	-				-0.0
1,424,329	+				-0.0
1,424,329	+				-0.0
1,424,329	+				-0.0
1,424,329	+				-0.0
1,424,330	-				-1.0
1,424,330	-				+0.3
1,424,449	+		Rru_A1207	0.12	+2.6
1,424,449	+		Rru_A1207	0.12	-0.0
1,424,449	+		Rru_A1207	0.12	+0.3
1,424,449	+		Rru_A1207	0.12	+1.5
1,424,450	-		Rru_A1207	0.13	-1.2
1,424,485	+		Rru_A1207	0.16	-1.1
1,424,486	-		Rru_A1207	0.16	+0.2
1,424,618	+		Rru_A1207	0.31	-0.0
1,424,620	+		Rru_A1207	0.31	-0.0
1,424,624	+		Rru_A1207	0.31	-0.0
1,424,625	-		Rru_A1207	0.31	+1.2
1,424,625	-		Rru_A1207	0.31	+0.3
1,424,665	+		Rru_A1207	0.36	-0.0
1,424,666	-		Rru_A1207	0.36	+0.2
1,424,808	-		Rru_A1207	0.51	+1.9
1,424,860	+		Rru_A1207	0.57	+1.8
1,425,023	+		Rru_A1207	0.74	-0.0
1,425,023	+		Rru_A1207	0.74	+0.1
1,425,023	+		Rru_A1207	0.74	+0.6
1,425,024	-		Rru_A1207	0.74	-0.0
1,425,024	-		Rru_A1207	0.74	-1.0
1,425,024	-		Rru_A1207	0.74	+0.2
1,425,024	-		Rru_A1207	0.74	+0.3
1,425,024	-		Rru_A1207	0.74	-0.3
1,425,024	-		Rru_A1207	0.74	-0.2
1,425,046	+		Rru_A1207	0.77	+0.3
1,425,046	+		Rru_A1207	0.77	+1.3
1,425,047	-		Rru_A1207	0.77	-0.0
1,425,047	-		Rru_A1207	0.77	-0.0
1,425,047	-		Rru_A1207	0.77	+1.2
1,425,047	-		Rru_A1207	0.77	-0.0
1,425,085	+		Rru_A1207	0.81	+0.6
1,425,086	-		Rru_A1207	0.81	-1.0
1,425,159	-		Rru_A1207	0.89	-0.0
1,425,263	+				-0.0
1,425,263	+				+0.5
1,425,264	-				-0.0
1,425,264	-				-0.0
1,425,264	-				-0.0
1,425,489	+		Rru_A1208	0.20	-0.0
1,425,489	+		Rru_A1208	0.20	-0.0
1,425,489	+		Rru_A1208	0.20	-1.0
1,425,489	+		Rru_A1208	0.20	-0.0
1,425,490	-		Rru_A1208	0.20	-0.0
1,425,490	-		Rru_A1208	0.20	-1.0
1,425,490	-		Rru_A1208	0.20	+0.4
1,425,490	-		Rru_A1208	0.20	-0.0
1,425,491	+		Rru_A1208	0.20	-0.0
1,425,491	+		Rru_A1208	0.20	-0.0
1,425,492	-		Rru_A1208	0.20	+0.6
1,425,492	-		Rru_A1208	0.20	-0.0
1,425,492	-		Rru_A1208	0.20	-0.8
1,425,835	-		Rru_A1208	0.50	-0.0
1,425,835	-		Rru_A1208	0.50	-0.0
1,425,960	+		Rru_A1208	0.61	-0.0