Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1199

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
1,415,789	-				-0.0
1,415,811	+				-0.0
1,415,874	+				+1.1
1,415,884	+				+0.5
1,415,916	+				+0.1
1,415,917	-				+1.7
1,415,922	+				+0.4
1,415,923	-				+0.4
1,415,931	-				+0.9
1,415,932	+				+0.6
1,415,943	+				+0.6
1,415,946	+				+0.7
1,415,966	+				-0.3
1,415,967	-				-0.0
1,416,074	+		Rru_A1198	0.17	-0.0
1,416,074	+		Rru_A1198	0.17	+1.6
1,416,400	+		Rru_A1198	0.71	+0.6
1,416,400	+		Rru_A1198	0.71	+1.7
1,416,401	-		Rru_A1198	0.71	+0.2
1,416,432	+		Rru_A1198	0.76	+0.3
1,416,432	+		Rru_A1198	0.76	+0.6
1,416,432	+		Rru_A1198	0.76	-0.0
1,416,433	-		Rru_A1198	0.77	-0.0
1,416,440	-		Rru_A1198	0.78	+1.4
1,416,584	+				-0.0
1,416,584	+				+0.7
1,416,584	+				-0.0
1,416,584	+				+0.7
1,416,585	-				+0.7
1,416,680	+				-1.0
1,416,681	-				+1.8
1,417,213	+		Rru_A1199	0.59	-0.0
1,417,213	+		Rru_A1199	0.59	+1.3
1,417,213	+		Rru_A1199	0.59	-0.0
1,417,213	+		Rru_A1199	0.59	+0.9
1,417,214	-		Rru_A1199	0.59	-0.0
1,417,214	-		Rru_A1199	0.59	-0.0
1,417,214	-		Rru_A1199	0.59	-0.0
1,417,333	+		Rru_A1199	0.72	-0.0
1,417,334	-		Rru_A1199	0.72	-0.0
1,417,352	+		Rru_A1199	0.75	+1.0
1,417,469	+		Rru_A1199	0.88	+1.3
1,417,469	+		Rru_A1199	0.88	-0.0
1,417,657	+				-0.0
1,417,813	+				-0.0
1,417,813	+				+0.4
1,417,855	+				-1.5
1,417,855	+				-0.0
1,417,855	+				-3.0
1,417,855	+				-1.0
1,417,856	-				-0.0
1,417,856	-				-3.3
1,417,856	-				-0.8
1,417,856	-				-2.3
1,417,856	-				-1.9
1,417,856	-				-2.6
1,417,857	+				-3.2
1,417,858	-				-0.0
1,417,858	-				-0.0
1,417,872	+				-1.7
1,418,002	+		Rru_A1200	0.20	-1.8
1,418,002	+		Rru_A1200	0.20	-1.6
1,418,002	+		Rru_A1200	0.20	-2.7
1,418,003	-		Rru_A1200	0.20	-2.8
1,418,044	-		Rru_A1200	0.25	-0.0
1,418,310	+		Rru_A1200	0.54	-0.0
1,418,311	-		Rru_A1200	0.54	-0.0