Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1189

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
1,405,525	+				+0.2
1,405,551	+				-0.0
1,406,174	+				+1.4
1,406,174	+				-0.0
1,406,174	+				+0.7
1,406,175	-				-1.7
1,406,175	-				-2.1
1,406,197	+				-2.8
1,406,273	+				-0.0
1,406,273	+				-0.0
1,406,274	-				-3.8
1,406,274	-				-2.5
1,406,274	-				-2.6
1,406,274	-				-1.8
1,406,386	+		Rru_A1189	0.14	-3.0
1,406,386	+		Rru_A1189	0.14	-3.7
1,406,387	-		Rru_A1189	0.14	-0.0
1,406,486	+		Rru_A1189	0.21	-2.7
1,406,525	-		Rru_A1189	0.23	-0.0
1,406,548	+		Rru_A1189	0.25	-0.0
1,406,587	+		Rru_A1189	0.28	-2.6
1,406,860	+		Rru_A1189	0.47	-1.3
1,406,861	-		Rru_A1189	0.47	-0.0
1,406,861	-		Rru_A1189	0.47	-0.0
1,406,861	-		Rru_A1189	0.47	-4.6
1,406,861	-		Rru_A1189	0.47	-0.0
1,406,921	+		Rru_A1189	0.51	-0.0
1,406,921	+		Rru_A1189	0.51	-2.7
1,406,921	+		Rru_A1189	0.51	-1.9
1,406,922	-		Rru_A1189	0.51	-2.5
1,406,922	-		Rru_A1189	0.51	-2.8
1,407,014	+		Rru_A1189	0.58	-1.0
1,407,014	+		Rru_A1189	0.58	-1.9
1,407,015	-		Rru_A1189	0.58	+0.3
1,407,015	-		Rru_A1189	0.58	-3.7
1,407,015	-		Rru_A1189	0.58	+0.2
1,407,170	+		Rru_A1189	0.69	-0.0
1,407,170	+		Rru_A1189	0.69	-0.0
1,407,170	+		Rru_A1189	0.69	-0.0
1,407,170	+		Rru_A1189	0.69	-2.9
1,407,170	+		Rru_A1189	0.69	-0.8
1,407,170	+		Rru_A1189	0.69	-3.0
1,407,171	-		Rru_A1189	0.69	-3.9
1,407,171	-		Rru_A1189	0.69	-1.0
1,407,172	+		Rru_A1189	0.69	-0.0
1,407,172	+		Rru_A1189	0.69	-2.0
1,407,172	+		Rru_A1189	0.69	-3.0
1,407,172	+		Rru_A1189	0.69	-3.7
1,407,172	+		Rru_A1189	0.69	-3.2
1,407,999	+		Rru_A1190	0.50	-2.0
1,408,213	-		Rru_A1190	0.85	-1.0
1,408,348	+				+1.1
1,408,349	-				-0.0
1,408,543	-		Rru_A1191	0.13	-0.0