Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1178

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
1,394,426	+				+0.1
1,394,426	+				-0.0
1,394,427	-				-0.3
1,394,616	+				-0.3
1,394,617	-				+0.2
1,394,617	-				+0.8
1,394,620	+				+0.8
1,394,698	-				-0.0
1,394,854	-		Rru_A1178	0.11	+0.2
1,394,928	+		Rru_A1178	0.18	+0.4
1,395,107	+		Rru_A1178	0.33	-0.0
1,395,107	+		Rru_A1178	0.33	+0.7
1,395,108	-		Rru_A1178	0.33	+1.0
1,395,108	-		Rru_A1178	0.33	-0.0
1,395,769	+				-0.0
1,395,769	+				-0.0
1,395,769	+				-0.0
1,395,769	+				+1.2
1,395,769	+				-0.0
1,395,801	+				+2.2
1,395,803	+				+0.8
1,395,803	+				+1.5
1,395,804	-				-0.0
1,395,827	-				-0.0
1,396,553	+		Rru_A1179	0.73	-2.0
1,396,741	+				-0.0
1,396,752	+				+0.5
1,396,753	-				-1.6