Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1175

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
1,390,535	+				-0.0
1,390,567	+				+0.7
1,390,567	+				+0.3
1,390,588	+				+0.7
1,390,661	+				-0.0
1,390,661	+				+0.9
1,390,662	-				-0.0
1,390,676	+				-0.0
1,390,765	-		Rru_A1174	0.19	+0.4
1,390,865	+		Rru_A1174	0.48	-0.0
1,390,865	+		Rru_A1174	0.48	+2.0
1,390,865	+		Rru_A1174	0.48	+1.7
1,390,865	+		Rru_A1174	0.48	-0.0
1,390,865	+		Rru_A1174	0.48	-1.0
1,390,866	-		Rru_A1174	0.49	-0.0
1,390,904	+		Rru_A1174	0.60	+0.9
1,390,905	-		Rru_A1174	0.60	-0.0
1,390,905	-		Rru_A1174	0.60	-1.0
1,390,905	-		Rru_A1174	0.60	-0.0
1,390,905	-		Rru_A1174	0.60	-0.0
1,391,161	+				-0.0
1,391,161	+				+0.8
1,391,161	+				+1.0
1,391,275	+				-1.0
1,391,294	+		Rru_A1175	0.10	+0.9
1,391,294	+		Rru_A1175	0.10	-1.0
1,391,294	+		Rru_A1175	0.10	-0.0
1,391,295	-		Rru_A1175	0.11	-0.0
1,391,295	-		Rru_A1175	0.11	-0.0
1,391,295	-		Rru_A1175	0.11	+1.4
1,391,518	+				-0.4
1,391,932	+		Rru_A1176	0.19	+0.7
1,391,932	+		Rru_A1176	0.19	-0.1
1,391,932	+		Rru_A1176	0.19	+0.6
1,391,933	-		Rru_A1176	0.19	-0.1
1,391,933	-		Rru_A1176	0.19	+1.0
1,392,068	-		Rru_A1176	0.32	-0.0
1,392,068	-		Rru_A1176	0.32	+0.3
1,392,070	-		Rru_A1176	0.33	-0.0
1,392,070	-		Rru_A1176	0.33	+0.4
1,392,070	-		Rru_A1176	0.33	+0.6
1,392,235	+		Rru_A1176	0.49	+1.3
1,392,236	-		Rru_A1176	0.49	+0.5
1,392,241	+		Rru_A1176	0.49	+0.3
1,392,241	+		Rru_A1176	0.49	+0.1
1,392,320	-		Rru_A1176	0.57	-0.0
1,392,352	+		Rru_A1176	0.60	+0.5
1,392,407	-		Rru_A1176	0.65	-0.5
1,392,412	+		Rru_A1176	0.66	+1.3
1,392,412	+		Rru_A1176	0.66	-0.0
1,392,413	-		Rru_A1176	0.66	-0.0
1,392,413	-		Rru_A1176	0.66	+1.0
1,392,413	-		Rru_A1176	0.66	+0.2
1,392,415	+		Rru_A1176	0.66	+0.2
1,392,416	-		Rru_A1176	0.66	+0.8
1,392,416	-		Rru_A1176	0.66	-0.0
1,392,416	-		Rru_A1176	0.66	+0.9
1,392,416	-		Rru_A1176	0.66	+0.6