Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1154

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
1,364,124	+				+1.1
1,364,125	-				-0.0
1,364,125	-				-0.0
1,364,212	+				-1.6
1,364,212	+				-1.6
1,364,213	-				-0.0
1,364,213	-				+0.8
1,364,213	-				-0.0
1,364,213	-				+1.9
1,364,213	-				+0.3
1,364,276	+				+0.8
1,364,276	+				-0.9
1,364,276	+				+0.6
1,364,277	-				-0.4
1,364,277	-				-0.0
1,364,354	+				-0.0
1,364,354	+				-0.0
1,364,354	+				+0.9
1,364,355	-				-0.0
1,364,355	-				+0.1
1,364,429	+				-0.0
1,364,429	+				-1.6
1,364,515	+				+0.1
1,364,737	-		Rru_A1153	0.24	-1.6
1,364,740	+		Rru_A1153	0.25	+0.7
1,364,740	+		Rru_A1153	0.25	+0.7
1,364,740	+		Rru_A1153	0.25	-0.7
1,364,740	+		Rru_A1153	0.25	+1.5
1,364,740	+		Rru_A1153	0.25	-0.0
1,364,741	-		Rru_A1153	0.25	+0.4
1,364,853	+		Rru_A1153	0.55	+0.4
1,364,853	+		Rru_A1153	0.55	-0.0
1,364,853	+		Rru_A1153	0.55	+0.5
1,364,853	+		Rru_A1153	0.55	-0.0
1,364,853	+		Rru_A1153	0.55	-0.4
1,364,854	-		Rru_A1153	0.55	-0.0
1,364,854	-		Rru_A1153	0.55	-1.0
1,364,857	+		Rru_A1153	0.56	-0.0
1,364,857	+		Rru_A1153	0.56	-0.6
1,364,857	+		Rru_A1153	0.56	+0.5
1,364,857	+		Rru_A1153	0.56	+0.9
1,364,857	+		Rru_A1153	0.56	+0.4
1,364,857	+		Rru_A1153	0.56	-0.0
1,364,858	-		Rru_A1153	0.56	-0.0
1,364,858	-		Rru_A1153	0.56	-0.0
1,364,858	-		Rru_A1153	0.56	-0.0
1,364,858	-		Rru_A1153	0.56	-2.3
1,364,858	-		Rru_A1153	0.56	-1.0
1,364,907	+		Rru_A1153	0.69	-0.0
1,364,908	-		Rru_A1153	0.69	+0.1
1,364,908	-		Rru_A1153	0.69	-0.0
1,364,919	+		Rru_A1153	0.72	-0.2
1,364,919	+		Rru_A1153	0.72	+1.9
1,364,920	-		Rru_A1153	0.73	+0.6
1,364,920	-		Rru_A1153	0.73	-0.1
1,365,088	+				+0.6
1,365,478	+		Rru_A1154	0.38	-0.0
1,365,479	-		Rru_A1154	0.38	+0.2
1,365,479	-		Rru_A1154	0.38	-0.0
1,365,479	-		Rru_A1154	0.38	+0.5
1,365,580	+		Rru_A1154	0.47	-0.0
1,365,581	-		Rru_A1154	0.47	-0.0
1,365,581	-		Rru_A1154	0.47	-0.2
1,365,581	-		Rru_A1154	0.47	+1.0
1,365,805	+		Rru_A1154	0.68	-0.0
1,365,805	+		Rru_A1154	0.68	+1.3
1,365,805	+		Rru_A1154	0.68	+0.6
1,365,806	-		Rru_A1154	0.68	-0.0
1,365,806	-		Rru_A1154	0.68	-0.0
1,365,899	+		Rru_A1154	0.76	-0.0
1,366,105	+				-0.0
1,366,105	+				+0.8
1,366,105	+				-0.0
1,366,106	-				-0.0
1,366,106	-				-0.0
1,366,288	+				-0.5
1,366,288	+				-0.0
1,366,288	+				-0.3
1,366,288	+				+0.1
1,366,289	-				-0.0
1,366,695	+				-0.0
1,366,696	-				+0.1
1,366,696	-				-0.4
1,366,725	+				-0.0
1,366,726	-				+0.7
1,366,810	+				+0.4
1,366,903	-				-0.0
1,366,903	-				-0.0
1,366,985	+				-0.4
1,366,985	+				+0.1
1,366,985	+				-0.0
1,366,986	-				-0.0
1,366,992	+				+0.0
1,366,992	+				+0.9
1,366,992	+				-0.6
1,366,992	+				-1.0
1,366,992	+				-1.0
1,366,992	+				-1.0
1,366,992	+				-0.0
1,366,993	-				+1.0
1,366,993	-				-0.0
1,366,993	-				-0.2
1,366,993	-				-0.1
1,367,030	+				-0.0
1,367,030	+				+2.2
1,367,031	-				-0.0
1,367,082	+				+0.2
1,367,082	+				+0.8
1,367,083	-				-1.0
1,367,122	+				-0.0