Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1126

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
1,326,605	+				+0.7
1,326,606	-				-0.0
1,326,606	-				+0.4
1,326,606	-				-1.0
1,326,615	-				+0.5
1,326,641	+				-0.0
1,326,641	+				-0.0
1,326,658	+				-0.0
1,326,658	+				-1.0
1,326,658	+				+0.6
1,326,659	-				+0.6
1,326,659	-				-1.6
1,326,659	-				-2.1
1,326,760	-		Rru_A1125	0.34	+1.0
1,327,046	+				+0.3
1,327,071	+				-0.0
1,327,222	+				-0.0
1,327,340	+				+0.2
1,327,340	+				-0.0
1,327,341	-				+0.7
1,327,387	-				-0.0
1,327,404	+				-0.0
1,327,404	+				+0.6
1,327,404	+				-0.0
1,327,404	+				+0.4
1,327,405	-				-0.0
1,327,405	-				-2.1
1,327,405	-				+1.1
1,327,405	-				-1.6
1,327,412	+				-0.0
1,327,412	+				-0.6
1,327,413	-				-0.0
1,327,500	+				-0.7
1,327,515	+				+0.5
1,327,515	+				-0.0
1,327,516	-				-0.0
1,327,516	-				-0.0
1,327,516	-				-0.0
1,327,602	+				-1.0
1,327,603	-				-0.3
1,327,603	-				-0.8
1,327,752	-		Rru_A1126	0.42	-1.5
1,327,758	+		Rru_A1126	0.43	+0.2
1,327,759	-		Rru_A1126	0.44	-0.0
1,328,020	+				+1.3
1,328,021	-				-0.0
1,328,021	-				+0.8
1,328,021	-				-0.0
1,328,087	+		Rru_A1127	0.20	+0.3
1,328,087	+		Rru_A1127	0.20	-0.0
1,328,087	+		Rru_A1127	0.20	+0.6
1,328,087	+		Rru_A1127	0.20	+0.6
1,328,088	-		Rru_A1127	0.21	-0.0
1,328,088	-		Rru_A1127	0.21	-0.0
1,328,331	-				-0.0
1,328,347	-				-0.0
1,328,429	+				-1.3
1,328,440	+				-0.1
1,328,441	-				-0.0
1,328,482	+				+0.6
1,328,676	+				+0.2
1,328,758	+				-0.0
1,328,777	+				+0.4
1,328,901	+				-0.0
1,328,901	+				-0.0
1,328,964	+				-0.0
1,328,965	-				+0.3
1,328,979	+				+0.4
1,328,998	+				-0.0