Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1121

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
1,319,034	+		Rru_A1120	0.54	+1.1
1,319,149	+		Rru_A1120	0.60	-0.0
1,319,149	+		Rru_A1120	0.60	+1.3
1,319,149	+		Rru_A1120	0.60	+2.2
1,319,149	+		Rru_A1120	0.60	-0.0
1,319,150	-		Rru_A1120	0.60	-0.0
1,319,150	-		Rru_A1120	0.60	-1.0
1,319,150	-		Rru_A1120	0.60	-0.0
1,319,151	+		Rru_A1120	0.60	+0.1
1,319,399	-		Rru_A1120	0.73	-0.2
1,319,400	+		Rru_A1120	0.73	-0.0
1,319,401	-		Rru_A1120	0.73	-0.0
1,319,401	-		Rru_A1120	0.73	+0.2
1,319,401	-		Rru_A1120	0.73	+0.8
1,319,410	+		Rru_A1120	0.74	+2.4
1,319,410	+		Rru_A1120	0.74	+1.9
1,319,683	-		Rru_A1120	0.89	-0.0
1,319,868	+				-0.0
1,319,868	+				+2.9
1,320,011	+				-0.0
1,320,011	+				+2.9
1,320,012	-				-1.8
1,320,144	+				-0.6
1,320,144	+				-0.0
1,320,144	+				-2.3
1,320,144	+				-1.2
1,320,145	-				-1.5
1,320,145	-				-0.0
1,320,145	-				-0.0
1,320,145	-				-1.4
1,320,195	+				-1.7
1,320,195	+				-0.0
1,320,196	-				-0.0
1,320,231	+				-0.0
1,320,231	+				-0.0
1,320,232	-				-1.9
1,320,645	+		Rru_A1121	0.18	-1.2
1,320,645	+		Rru_A1121	0.18	-1.7
1,320,645	+		Rru_A1121	0.18	-1.1
1,320,646	-		Rru_A1121	0.18	-1.2
1,320,646	-		Rru_A1121	0.18	-0.0
1,320,855	+		Rru_A1121	0.24	-1.7
1,320,856	-		Rru_A1121	0.24	-0.8
1,320,947	+		Rru_A1121	0.26	-2.3
1,320,947	+		Rru_A1121	0.26	-0.0
1,320,947	+		Rru_A1121	0.26	-0.8
1,320,948	-		Rru_A1121	0.27	+0.2
1,320,948	-		Rru_A1121	0.27	-0.0
1,320,948	-		Rru_A1121	0.27	-1.8
1,320,948	-		Rru_A1121	0.27	-1.6
1,320,948	-		Rru_A1121	0.27	-0.0
1,320,948	-		Rru_A1121	0.27	-0.4
1,320,948	-		Rru_A1121	0.27	-1.3
1,320,948	-		Rru_A1121	0.27	-0.0
1,321,198	-		Rru_A1121	0.34	-0.0
1,321,221	+		Rru_A1121	0.34	-0.0
1,321,222	-		Rru_A1121	0.34	-2.7
1,321,224	+		Rru_A1121	0.34	+0.5
1,321,224	+		Rru_A1121	0.34	-0.6
1,321,225	-		Rru_A1121	0.35	-0.1
1,321,225	-		Rru_A1121	0.35	-0.0
1,321,386	+		Rru_A1121	0.39	-4.0
1,321,386	+		Rru_A1121	0.39	-1.9
1,321,386	+		Rru_A1121	0.39	-0.0
1,321,386	+		Rru_A1121	0.39	-0.0
1,321,387	-		Rru_A1121	0.39	-0.0
1,321,387	-		Rru_A1121	0.39	-0.0
1,321,387	-		Rru_A1121	0.39	-1.0
1,321,387	-		Rru_A1121	0.39	-3.7
1,321,387	-		Rru_A1121	0.39	-0.4
1,321,388	+		Rru_A1121	0.39	-0.2
1,321,388	+		Rru_A1121	0.39	-0.0
1,321,389	-		Rru_A1121	0.39	-0.0
1,321,389	-		Rru_A1121	0.39	-1.7
1,321,389	-		Rru_A1121	0.39	-2.3
1,321,389	-		Rru_A1121	0.39	-2.5
1,321,740	+		Rru_A1121	0.49	-0.0
1,321,740	+		Rru_A1121	0.49	-1.2
1,321,741	-		Rru_A1121	0.49	-0.4
1,321,868	+		Rru_A1121	0.53	-0.0
1,321,868	+		Rru_A1121	0.53	-1.0
1,321,868	+		Rru_A1121	0.53	-0.0
1,321,869	-		Rru_A1121	0.53	-0.2
1,321,869	-		Rru_A1121	0.53	-1.2
1,321,869	-		Rru_A1121	0.53	-0.0
1,321,912	-		Rru_A1121	0.54	-0.9
1,321,912	-		Rru_A1121	0.54	-2.2
1,321,913	+		Rru_A1121	0.54	-0.0
1,321,914	-		Rru_A1121	0.54	-0.0
1,321,914	-		Rru_A1121	0.54	-1.3
1,321,953	-		Rru_A1121	0.56	-3.5
1,321,953	-		Rru_A1121	0.56	-0.0
1,322,015	+		Rru_A1121	0.57	-1.9
1,322,112	+		Rru_A1121	0.60	-0.8
1,322,113	-		Rru_A1121	0.60	-1.3
1,322,120	+		Rru_A1121	0.60	-0.0
1,322,121	-		Rru_A1121	0.60	-1.6
1,322,124	+		Rru_A1121	0.60	-2.3
1,322,124	+		Rru_A1121	0.60	-1.5
1,322,124	+		Rru_A1121	0.60	-1.3
1,322,124	+		Rru_A1121	0.60	-0.0
1,322,124	+		Rru_A1121	0.60	-0.0
1,322,124	+		Rru_A1121	0.60	-1.6
1,322,125	-		Rru_A1121	0.61	-2.9
1,322,125	-		Rru_A1121	0.61	-1.4
1,322,125	-		Rru_A1121	0.61	-0.9
1,322,127	+		Rru_A1121	0.61	-0.8
1,322,127	+		Rru_A1121	0.61	-1.2
1,322,168	+		Rru_A1121	0.62	-0.0
1,322,169	-		Rru_A1121	0.62	-1.9
1,322,169	-		Rru_A1121	0.62	-1.6
1,322,218	-		Rru_A1121	0.63	-2.8
1,322,535	+		Rru_A1121	0.72	-1.0
1,322,535	+		Rru_A1121	0.72	-1.9
1,322,535	+		Rru_A1121	0.72	-1.0
1,322,535	+		Rru_A1121	0.72	-0.8
1,322,535	+		Rru_A1121	0.72	-2.1
1,322,535	+		Rru_A1121	0.72	-0.0
1,322,536	-		Rru_A1121	0.72	-2.5
1,322,536	-		Rru_A1121	0.72	-1.5
1,322,536	-		Rru_A1121	0.72	-0.0
1,322,536	-		Rru_A1121	0.72	-1.1
1,322,536	-		Rru_A1121	0.72	-0.6
1,322,536	-		Rru_A1121	0.72	-0.0
1,322,536	-		Rru_A1121	0.72	-1.7
1,322,536	-		Rru_A1121	0.72	-0.8
1,322,631	+		Rru_A1121	0.75	-0.0
1,322,631	+		Rru_A1121	0.75	-2.6
1,322,631	+		Rru_A1121	0.75	-0.8
1,322,631	+		Rru_A1121	0.75	-1.6
1,322,632	-		Rru_A1121	0.75	-0.0
1,322,709	+		Rru_A1121	0.77	-0.0
1,322,709	+		Rru_A1121	0.77	-0.0
1,322,709	+		Rru_A1121	0.77	-1.2
1,322,710	-		Rru_A1121	0.77	-0.0
1,322,710	-		Rru_A1121	0.77	-0.0
1,322,710	-		Rru_A1121	0.77	-1.4
1,322,710	-		Rru_A1121	0.77	-0.0
1,322,710	-		Rru_A1121	0.77	-0.0
1,322,710	-		Rru_A1121	0.77	-0.0
1,322,711	+		Rru_A1121	0.77	-0.0
1,322,711	+		Rru_A1121	0.77	-1.9
1,322,711	+		Rru_A1121	0.77	-1.0
1,322,711	+		Rru_A1121	0.77	-0.0
1,322,711	+		Rru_A1121	0.77	-0.0
1,322,711	+		Rru_A1121	0.77	-1.8
1,322,711	+		Rru_A1121	0.77	-0.0
1,322,712	-		Rru_A1121	0.77	-1.0
1,322,712	-		Rru_A1121	0.77	-1.4
1,322,712	-		Rru_A1121	0.77	-1.8
1,322,979	+		Rru_A1121	0.85	-1.6
1,322,980	-		Rru_A1121	0.85	-2.5
1,322,980	-		Rru_A1121	0.85	-1.3
1,322,988	+		Rru_A1121	0.85	-2.0
1,322,989	-		Rru_A1121	0.85	-1.2
1,323,069	+		Rru_A1121	0.88	-0.8
1,323,069	+		Rru_A1121	0.88	-1.1
1,323,069	+		Rru_A1121	0.88	-1.0
1,323,069	+		Rru_A1121	0.88	-0.0
1,323,070	-		Rru_A1121	0.88	-0.0
1,323,343	+				-1.0
1,323,344	-				-0.0
1,323,480	+				-1.2
1,323,481	-				-0.0
1,323,481	-				-0.0
1,323,603	-				+0.2
1,323,717	+		Rru_A1122	0.18	-0.0
1,323,717	+		Rru_A1122	0.18	-0.0
1,323,765	+		Rru_A1122	0.23	+0.9
1,323,886	-		Rru_A1122	0.35	+0.5
1,323,982	+		Rru_A1122	0.45	+0.6
1,323,983	-		Rru_A1122	0.45	-0.5
1,323,983	-		Rru_A1122	0.45	-0.7
1,324,070	+		Rru_A1122	0.54	-0.0
1,324,162	+		Rru_A1122	0.63	+0.5
1,324,163	-		Rru_A1122	0.64	-0.2
1,324,163	-		Rru_A1122	0.64	+1.6
1,324,163	-		Rru_A1122	0.64	-0.2
1,324,242	-		Rru_A1122	0.72	-0.5
1,324,353	+		Rru_A1122	0.83	+0.4