Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1112

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
1,306,779	+		Rru_A1111	0.12	+1.0
1,306,779	+		Rru_A1111	0.12	+3.1
1,306,780	-		Rru_A1111	0.12	-0.0
1,306,780	-		Rru_A1111	0.12	+2.8
1,306,780	-		Rru_A1111	0.12	-1.3
1,306,780	-		Rru_A1111	0.12	-0.0
1,306,847	+		Rru_A1111	0.19	+1.5
1,306,848	-		Rru_A1111	0.19	+2.4
1,306,848	-		Rru_A1111	0.19	-0.0
1,306,848	-		Rru_A1111	0.19	+1.0
1,306,895	+		Rru_A1111	0.23	-2.0
1,306,895	+		Rru_A1111	0.23	+1.2
1,306,895	+		Rru_A1111	0.23	+2.5
1,306,896	-		Rru_A1111	0.23	+2.0
1,306,896	-		Rru_A1111	0.23	+2.1
1,307,111	-		Rru_A1111	0.44	+1.7
1,307,111	-		Rru_A1111	0.44	+2.1
1,307,111	-		Rru_A1111	0.44	+1.5
1,307,198	+		Rru_A1111	0.53	-0.0
1,307,199	-		Rru_A1111	0.53	+2.0
1,307,199	-		Rru_A1111	0.53	-0.0
1,307,348	+		Rru_A1111	0.67	+1.9
1,307,371	+		Rru_A1111	0.69	-0.0
1,307,371	+		Rru_A1111	0.69	-1.6
1,307,371	+		Rru_A1111	0.69	-0.0
1,307,371	+		Rru_A1111	0.69	+1.9
1,307,372	-		Rru_A1111	0.69	-0.0
1,307,372	-		Rru_A1111	0.69	+2.3
1,307,372	-		Rru_A1111	0.69	+1.8
1,307,478	+		Rru_A1111	0.80	-0.0
1,307,478	+		Rru_A1111	0.80	+0.5
1,307,479	-		Rru_A1111	0.80	+1.2
1,307,479	-		Rru_A1111	0.80	-1.6
1,307,570	+		Rru_A1111	0.89	-0.0
1,307,570	+		Rru_A1111	0.89	+1.5
1,307,570	+		Rru_A1111	0.89	+2.7
1,307,571	-		Rru_A1111	0.89	+1.9
1,307,571	-		Rru_A1111	0.89	+2.2
1,307,571	-		Rru_A1111	0.89	-0.0
1,308,058	+		Rru_A1112	0.70	-1.6
1,308,729	+				+0.1
1,308,730	-				-0.0
1,308,874	+		Rru_A1114	0.15	+1.3
1,309,054	-		Rru_A1114	0.27	+1.0
1,309,054	-		Rru_A1114	0.27	+1.2
1,309,054	-		Rru_A1114	0.27	+0.6
1,309,054	-		Rru_A1114	0.27	+1.0