Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1084

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
1,273,899	-				-0.0
1,273,899	-				-0.0
1,274,194	+				-0.0
1,274,194	+				-0.3
1,274,194	+				-0.0
1,274,194	+				-0.0
1,274,194	+				+0.8
1,274,195	-				+0.5
1,274,308	+		Rru_A1083	0.10	+0.6
1,274,363	-		Rru_A1083	0.26	-0.0
1,274,364	+		Rru_A1083	0.26	-0.0
1,274,365	-		Rru_A1083	0.26	-0.0
1,274,623	+				-0.0
1,274,628	+				-0.0
1,274,678	-				-0.3
1,274,683	+				-0.0
1,274,738	+				+1.3
1,274,846	+				-0.0
1,274,846	+				-1.0
1,274,846	+				+0.1
1,274,846	+				-0.0
1,274,847	-				-0.0
1,274,847	-				-0.8
1,274,847	-				-0.0
1,275,435	+		Rru_A1084	0.75	-0.4
1,275,436	-		Rru_A1084	0.75	-0.9
1,275,436	-		Rru_A1084	0.75	-2.3
1,275,498	+		Rru_A1084	0.83	-0.0
1,275,499	-		Rru_A1084	0.83	-0.0
1,275,499	-		Rru_A1084	0.83	-0.0
1,275,609	-				-2.3
1,275,635	+				-0.0
1,275,636	-				-0.0
1,276,206	-		Rru_A1085	0.71	+1.7
1,276,206	-		Rru_A1085	0.71	+1.0
1,276,206	-		Rru_A1085	0.71	-1.0
1,276,207	+		Rru_A1085	0.71	-0.0
1,276,451	-				-0.0
1,276,579	+				+0.1
1,276,579	+				-0.4
1,276,579	+				-0.1