Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1071

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
1,259,799	+		Rru_A1069	0.77	+0.7
1,259,853	+		Rru_A1069	0.84	+0.4
1,259,853	+		Rru_A1069	0.84	+1.5
1,259,853	+		Rru_A1069	0.84	-0.0
1,259,854	-		Rru_A1069	0.84	-2.8
1,259,907	+				-0.0
1,259,908	-				-0.0
1,259,978	+				+1.4
1,260,071	+				-0.0
1,260,175	-		Rru_A1070	0.22	+0.9
1,260,396	-		Rru_A1070	0.69	-0.0
1,260,423	+		Rru_A1070	0.75	-0.0
1,260,423	+		Rru_A1070	0.75	-0.0
1,260,423	+		Rru_A1070	0.75	-1.6
1,260,424	-		Rru_A1070	0.75	-0.0
1,260,424	-		Rru_A1070	0.75	-0.0
1,260,424	-		Rru_A1070	0.75	-0.0
1,260,424	-		Rru_A1070	0.75	+0.1
1,260,425	+		Rru_A1070	0.75	+2.3
1,260,425	+		Rru_A1070	0.75	-0.0
1,260,425	+		Rru_A1070	0.75	+0.2
1,260,426	-		Rru_A1070	0.76	-1.0
1,260,534	+				-0.9
1,260,534	+				-0.0
1,260,534	+				+0.6
1,260,535	-				-0.0
1,260,535	-				+1.5
1,260,546	+				-0.0
1,260,703	+				-0.0
1,261,045	+		Rru_A1071	0.13	-0.3
1,261,045	+		Rru_A1071	0.13	+0.7
1,261,046	-		Rru_A1071	0.13	-0.0
1,261,211	+		Rru_A1071	0.21	+0.2
1,261,212	-		Rru_A1071	0.21	+0.8
1,261,265	+		Rru_A1071	0.23	+0.7
1,261,316	+		Rru_A1071	0.26	-0.0
1,261,335	-		Rru_A1071	0.27	+1.8
1,261,341	-		Rru_A1071	0.27	-0.6
1,261,492	+		Rru_A1071	0.35	-0.0
1,261,492	+		Rru_A1071	0.35	-0.1
1,261,492	+		Rru_A1071	0.35	-0.0
1,261,492	+		Rru_A1071	0.35	-0.0
1,261,493	-		Rru_A1071	0.35	-0.0
1,261,493	-		Rru_A1071	0.35	+0.2
1,261,493	-		Rru_A1071	0.35	-0.4
1,261,493	-		Rru_A1071	0.35	+0.0
1,261,510	+		Rru_A1071	0.35	+0.9
1,261,510	+		Rru_A1071	0.35	-0.4
1,261,510	+		Rru_A1071	0.35	-0.0
1,261,511	-		Rru_A1071	0.35	-0.0
1,261,511	-		Rru_A1071	0.35	-0.0
1,261,675	+		Rru_A1071	0.44	-0.0
1,261,675	+		Rru_A1071	0.44	-0.0
1,262,354	+		Rru_A1071	0.77	-1.0
1,262,354	+		Rru_A1071	0.77	-0.0
1,262,355	-		Rru_A1071	0.77	-0.0
1,262,629	+				+0.6
1,262,629	+				-0.0
1,262,629	+				+0.0
1,262,629	+				-1.0
1,262,629	+				-1.0
1,262,629	+				-0.0
1,262,629	+				-0.0
1,262,630	-				+1.0
1,262,630	-				+0.4
1,262,699	+				-0.0
1,262,699	+				+0.9
1,262,699	+				+0.3
1,262,700	-				-0.0
1,262,700	-				+1.1
1,262,759	-				+0.7
1,262,801	-				-0.2
1,262,801	-				-1.6
1,262,810	-				-0.0
1,262,819	+				+1.6
1,262,899	+				-0.0
1,262,899	+				-0.0
1,262,899	+				+0.3
1,262,900	-				+0.4
1,262,900	-				+0.5
1,262,900	-				+0.6
1,262,900	-				-0.0
1,262,900	-				-0.2
1,263,170	+				-0.0
1,263,170	+				+1.0
1,263,420	-				-0.0