Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1068

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
1,257,433	+		Rru_A1067	0.17	-0.0
1,257,433	+		Rru_A1067	0.17	+0.4
1,257,434	-		Rru_A1067	0.17	-0.0
1,257,490	+		Rru_A1067	0.25	-0.0
1,257,490	+		Rru_A1067	0.25	-1.0
1,257,491	-		Rru_A1067	0.25	+0.8
1,257,491	-		Rru_A1067	0.25	+1.2
1,257,534	-		Rru_A1067	0.31	+0.2
1,257,599	+		Rru_A1067	0.41	+1.0
1,257,600	-		Rru_A1067	0.41	-0.4
1,257,619	+		Rru_A1067	0.44	-0.0
1,257,619	+		Rru_A1067	0.44	-0.0
1,257,619	+		Rru_A1067	0.44	-0.0
1,257,620	-		Rru_A1067	0.44	+0.8
1,258,029	-				-0.0
1,258,039	+				-0.0
1,258,039	+				+1.7
1,258,040	-				-0.0
1,258,040	-				+0.5
1,258,103	+				+0.6
1,258,103	+				+0.6
1,258,104	-				-1.0
1,258,104	-				-0.0
1,258,104	-				-0.0
1,258,240	+		Rru_A1068	0.19	+0.8
1,258,241	-		Rru_A1068	0.19	+0.5
1,258,262	+		Rru_A1068	0.21	-0.0
1,258,262	+		Rru_A1068	0.21	+0.9
1,258,262	+		Rru_A1068	0.21	-0.0
1,258,262	+		Rru_A1068	0.21	+0.9
1,258,263	-		Rru_A1068	0.21	+0.6
1,258,263	-		Rru_A1068	0.21	-0.0
1,258,263	-		Rru_A1068	0.21	+0.6
1,258,263	-		Rru_A1068	0.21	+0.7
1,258,263	-		Rru_A1068	0.21	+1.7
1,258,263	-		Rru_A1068	0.21	+0.5
1,258,471	+		Rru_A1068	0.38	-0.0
1,258,471	+		Rru_A1068	0.38	+1.4
1,258,472	-		Rru_A1068	0.39	-1.0
1,258,658	+		Rru_A1068	0.54	+0.1
1,258,658	+		Rru_A1068	0.54	-0.0
1,258,659	-		Rru_A1068	0.54	+0.7
1,258,868	+		Rru_A1068	0.72	-0.1
1,258,869	-		Rru_A1068	0.72	+1.0
1,259,030	+		Rru_A1068	0.86	+0.5
1,259,030	+		Rru_A1068	0.86	+0.3
1,259,030	+		Rru_A1068	0.86	+1.0
1,259,030	+		Rru_A1068	0.86	+0.5
1,259,030	+		Rru_A1068	0.86	-0.0
1,259,031	-		Rru_A1068	0.86	+0.6
1,259,031	-		Rru_A1068	0.86	+0.5
1,259,031	-		Rru_A1068	0.86	-1.0
1,259,217	+				-0.0
1,259,218	-				-0.4
1,259,218	-				+0.9
1,259,228	+				+0.5
1,259,229	-				+0.7
1,259,229	-				+1.1
1,259,229	-				+0.1
1,259,781	+		Rru_A1069	0.74	+1.6
1,259,781	+		Rru_A1069	0.74	-0.0
1,259,781	+		Rru_A1069	0.74	+0.8
1,259,784	+		Rru_A1069	0.75	+1.6
1,259,784	+		Rru_A1069	0.75	-1.0
1,259,784	+		Rru_A1069	0.75	+2.0
1,259,784	+		Rru_A1069	0.75	-0.0
1,259,784	+		Rru_A1069	0.75	-0.0
1,259,785	-		Rru_A1069	0.75	-0.0
1,259,785	-		Rru_A1069	0.75	+0.6
1,259,799	+		Rru_A1069	0.77	+0.7
1,259,853	+		Rru_A1069	0.84	+0.4
1,259,853	+		Rru_A1069	0.84	+1.5
1,259,853	+		Rru_A1069	0.84	-0.0
1,259,854	-		Rru_A1069	0.84	-2.8
1,259,907	+				-0.0
1,259,908	-				-0.0
1,259,978	+				+1.4
1,260,071	+				-0.0
1,260,175	-		Rru_A1070	0.22	+0.9