Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1044

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
1,236,578	-				-0.0
1,236,618	+				+2.1
1,236,619	-				+0.4
1,236,619	-				-0.0
1,236,619	-				+1.3
1,236,619	-				+2.0
1,236,619	-				+1.3
1,236,635	-				+0.1
1,236,635	-				-0.0
1,236,733	+		Rru_A1044	0.15	-0.0
1,236,733	+		Rru_A1044	0.15	-1.7
1,236,788	+		Rru_A1044	0.25	-1.8
1,237,059	-		Rru_A1044	0.78	+1.3
1,237,059	-		Rru_A1044	0.78	+0.9
1,237,059	-		Rru_A1044	0.78	-0.0
1,237,059	-		Rru_A1044	0.78	-0.0
1,237,083	-		Rru_A1044	0.83	+0.7
1,237,166	+				-0.0
1,237,166	+				-0.0
1,237,167	-				-0.0
1,237,167	-				-0.0
1,237,172	+				-0.7
1,237,172	+				+0.7
1,237,172	+				-1.6
1,237,173	-				-0.0
1,237,173	-				+2.9
1,237,173	-				+1.6
1,237,173	-				+1.8
1,237,280	+				-0.0
1,237,280	+				+1.9
1,237,280	+				+2.5
1,237,281	-				-0.0
1,237,281	-				+2.1
1,237,281	-				-0.0
1,237,637	+		Rru_A1045	0.54	-0.0
1,237,638	-		Rru_A1045	0.54	-0.5
1,237,638	-		Rru_A1045	0.54	+1.3
1,237,638	-		Rru_A1045	0.54	+1.7
1,237,638	-		Rru_A1045	0.54	-0.0
1,237,638	-		Rru_A1045	0.54	+1.6
1,237,697	+		Rru_A1045	0.63	+2.2
1,237,697	+		Rru_A1045	0.63	+3.0
1,237,698	-		Rru_A1045	0.63	+0.7
1,237,698	-		Rru_A1045	0.63	+2.1
1,237,699	+		Rru_A1045	0.63	+2.8
1,237,727	+		Rru_A1045	0.67	+2.1
1,237,728	-		Rru_A1045	0.67	-0.0
1,237,728	-		Rru_A1045	0.67	-0.0
1,237,728	-		Rru_A1045	0.67	+2.2
1,237,759	+		Rru_A1045	0.72	+1.8
1,237,760	-		Rru_A1045	0.72	+3.2
1,237,760	-		Rru_A1045	0.72	-0.0
1,237,905	+				+0.5
1,237,905	+				+1.6
1,237,906	-				+0.5