Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1037

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
1,228,662	+				+0.6
1,228,662	+				-0.0
1,228,662	+				-0.0
1,228,707	+				-0.2
1,228,708	-				-0.0
1,228,708	-				-0.0
1,228,708	-				-0.0
1,228,708	-				-1.6
1,228,708	-				+0.9
1,228,726	+				+0.6
1,228,726	+				+0.9
1,228,779	+				-0.0
1,228,780	-				-0.0
1,228,780	-				-0.0
1,228,824	+				+1.0
1,228,824	+				+1.1
1,228,896	-				+0.3
1,228,896	-				-0.0
1,228,898	-				-0.6
1,229,147	+		Rru_A1036	0.31	-0.2
1,229,147	+		Rru_A1036	0.31	+0.6
1,229,147	+		Rru_A1036	0.31	-1.3
1,229,147	+		Rru_A1036	0.31	+0.0
1,229,147	+		Rru_A1036	0.31	+0.2
1,229,147	+		Rru_A1036	0.31	+1.3
1,229,147	+		Rru_A1036	0.31	+0.3
1,229,148	-		Rru_A1036	0.31	-0.0
1,229,148	-		Rru_A1036	0.31	+0.1
1,229,148	-		Rru_A1036	0.31	-0.0
1,229,148	-		Rru_A1036	0.31	-0.4
1,229,148	-		Rru_A1036	0.31	-0.3
1,229,148	-		Rru_A1036	0.31	-0.2
1,229,148	-		Rru_A1036	0.31	+0.3
1,229,465	+		Rru_A1036	0.79	+1.6
1,229,465	+		Rru_A1036	0.79	+0.9
1,229,466	-		Rru_A1036	0.79	-0.0
1,229,852	-		Rru_A1037	0.20	+0.9
1,229,906	+		Rru_A1037	0.25	+0.9
1,229,906	+		Rru_A1037	0.25	+0.7
1,229,906	+		Rru_A1037	0.25	-0.8
1,229,907	-		Rru_A1037	0.25	-0.2
1,230,170	+		Rru_A1037	0.48	+0.1
1,230,170	+		Rru_A1037	0.48	+1.1
1,230,170	+		Rru_A1037	0.48	-0.1
1,230,170	+		Rru_A1037	0.48	-0.6
1,230,336	+		Rru_A1037	0.62	+1.6
1,230,590	+		Rru_A1037	0.84	+0.1
1,230,590	+		Rru_A1037	0.84	-0.0
1,230,814	+				-1.0
1,230,815	-				-0.0
1,230,820	+				-0.0
1,230,821	-				-0.0
1,231,012	+		Rru_A1038	0.19	-0.3
1,231,013	-		Rru_A1038	0.19	-0.0
1,231,204	+		Rru_A1038	0.38	+0.2
1,231,205	-		Rru_A1038	0.38	-0.0
1,231,481	-		Rru_A1038	0.65	-0.4
1,231,481	-		Rru_A1038	0.65	-0.8
1,231,519	+		Rru_A1038	0.68	-1.0
1,231,519	+		Rru_A1038	0.68	+0.8
1,231,520	-		Rru_A1038	0.69	+0.3
1,231,560	-		Rru_A1038	0.72	-0.0