Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1034

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
1,222,745	-				-0.0
1,222,908	-				+1.5
1,222,909	+				+0.6
1,222,909	+				-0.0
1,222,910	-				-0.0
1,222,953	-				+0.3
1,223,081	+		Rru_A1033	0.32	-0.0
1,223,360	+		Rru_A1033	0.87	+1.8
1,223,361	-		Rru_A1033	0.87	+1.1
1,223,361	-		Rru_A1033	0.87	-0.0
1,223,364	+		Rru_A1033	0.87	+1.4
1,223,364	+		Rru_A1033	0.87	+1.3
1,223,364	+		Rru_A1033	0.87	+1.4
1,223,365	-		Rru_A1033	0.88	+1.1
1,223,407	-				+0.8
1,223,407	-				+0.5
1,223,407	-				+0.6
1,223,407	-				+1.0
1,223,407	-				+0.7
1,223,590	+				+2.0
1,223,590	+				+1.9
1,223,591	-				+0.3
1,223,591	-				+1.4
1,224,107	+		Rru_A1034	0.18	+0.5
1,224,138	+		Rru_A1034	0.19	-0.0
1,224,138	+		Rru_A1034	0.19	+0.1
1,224,138	+		Rru_A1034	0.19	-0.0
1,224,138	+		Rru_A1034	0.19	+0.6
1,224,138	+		Rru_A1034	0.19	+0.4
1,224,139	-		Rru_A1034	0.19	+0.7
1,224,575	+		Rru_A1034	0.38	+0.2
1,224,575	+		Rru_A1034	0.38	-0.0
1,224,575	+		Rru_A1034	0.38	-0.4
1,224,575	+		Rru_A1034	0.38	+0.7
1,224,576	-		Rru_A1034	0.38	+0.9
1,224,576	-		Rru_A1034	0.38	-0.0
1,224,576	-		Rru_A1034	0.38	+1.3
1,224,576	-		Rru_A1034	0.38	+1.0
1,224,576	-		Rru_A1034	0.38	-0.0
1,224,576	-		Rru_A1034	0.38	+0.4
1,224,909	+		Rru_A1034	0.53	-0.0
1,224,910	-		Rru_A1034	0.53	+1.3
1,224,910	-		Rru_A1034	0.53	+0.9
1,224,910	-		Rru_A1034	0.53	-0.0
1,225,682	+		Rru_A1034	0.87	+0.5
1,225,682	+		Rru_A1034	0.87	-0.0
1,225,683	-		Rru_A1034	0.87	+0.9
1,226,025	-				-0.6
1,226,195	-				+0.3
1,226,319	-				-0.8
1,226,374	+		Rru_A1035	0.11	+0.1
1,226,375	-		Rru_A1035	0.11	+0.2
1,226,689	-		Rru_A1035	0.23	-0.0
1,226,816	-		Rru_A1035	0.27	+0.6
1,226,862	-		Rru_A1035	0.29	+0.2
1,226,863	+		Rru_A1035	0.29	+0.1
1,226,863	+		Rru_A1035	0.29	-0.1
1,226,863	+		Rru_A1035	0.29	+0.3
1,226,863	+		Rru_A1035	0.29	-0.0
1,226,864	-		Rru_A1035	0.29	-0.0
1,226,864	-		Rru_A1035	0.29	+0.0
1,226,864	-		Rru_A1035	0.29	+0.6
1,226,866	+		Rru_A1035	0.29	-0.0
1,226,911	+		Rru_A1035	0.31	+0.1
1,226,912	-		Rru_A1035	0.31	-0.2
1,226,947	+		Rru_A1035	0.32	-0.0
1,226,947	+		Rru_A1035	0.32	+0.0