Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1013

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
1,200,252	+		Rru_A1012	0.49	-0.0
1,200,252	+		Rru_A1012	0.49	-0.0
1,200,252	+		Rru_A1012	0.49	-0.4
1,200,252	+		Rru_A1012	0.49	-0.0
1,200,252	+		Rru_A1012	0.49	+0.5
1,200,253	-		Rru_A1012	0.49	-0.9
1,200,253	-		Rru_A1012	0.49	+0.5
1,200,270	-		Rru_A1012	0.50	-0.5
1,200,270	-		Rru_A1012	0.50	+1.7
1,200,315	+		Rru_A1012	0.53	-0.0
1,200,315	+		Rru_A1012	0.53	-0.1
1,200,315	+		Rru_A1012	0.53	-0.0
1,200,315	+		Rru_A1012	0.53	+0.3
1,200,316	-		Rru_A1012	0.53	-0.0
1,200,316	-		Rru_A1012	0.53	-0.4
1,200,316	-		Rru_A1012	0.53	-0.0
1,200,316	-		Rru_A1012	0.53	-0.0
1,200,316	-		Rru_A1012	0.53	-0.0
1,200,387	+		Rru_A1012	0.57	-0.0
1,200,387	+		Rru_A1012	0.57	+0.4
1,200,388	-		Rru_A1012	0.57	+0.7
1,200,388	-		Rru_A1012	0.57	-0.0
1,200,388	-		Rru_A1012	0.57	-0.2
1,200,450	+		Rru_A1012	0.61	-0.0
1,200,838	-		Rru_A1012	0.87	-0.0
1,200,846	+		Rru_A1012	0.87	-0.0
1,200,846	+		Rru_A1012	0.87	+1.5
1,200,847	-		Rru_A1012	0.87	-0.0
1,200,847	-		Rru_A1012	0.87	+0.2
1,200,847	-		Rru_A1012	0.87	-0.0
1,200,847	-		Rru_A1012	0.87	-0.3
1,200,936	+				-0.0
1,200,936	+				+1.6
1,200,936	+				-0.0
1,200,937	-				+0.2
1,200,937	-				+1.0
1,201,065	+				-0.0
1,201,066	-				-0.0
1,201,418	+		Rru_A1013	0.10	+1.3
1,201,447	+		Rru_A1013	0.12	+1.6
1,201,908	+		Rru_A1013	0.37	-0.0
1,201,908	+		Rru_A1013	0.37	+0.7
1,201,993	+		Rru_A1013	0.41	-0.0
1,201,993	+		Rru_A1013	0.41	-0.0
1,201,993	+		Rru_A1013	0.41	-0.0
1,201,994	-		Rru_A1013	0.41	-0.0
1,201,994	-		Rru_A1013	0.41	-0.0
1,202,284	+		Rru_A1013	0.57	-0.0
1,202,285	-		Rru_A1013	0.57	+0.2
1,202,285	-		Rru_A1013	0.57	+0.2
1,202,285	-		Rru_A1013	0.57	-0.0
1,202,320	-		Rru_A1013	0.59	-1.6
1,202,398	+		Rru_A1013	0.64	-0.0
1,202,399	-		Rru_A1013	0.64	-1.0
1,202,400	+		Rru_A1013	0.64	-0.0
1,202,400	+		Rru_A1013	0.64	-0.0
1,202,401	-		Rru_A1013	0.64	-0.0
1,202,401	-		Rru_A1013	0.64	-0.0
1,202,401	-		Rru_A1013	0.64	-0.2
1,202,401	-		Rru_A1013	0.64	+0.3
1,202,587	+		Rru_A1013	0.74	+0.4
1,202,700	+		Rru_A1013	0.80	-0.2
1,202,840	-		Rru_A1013	0.88	-0.0
1,202,892	+				-0.0
1,202,960	-				+1.2
1,203,224	+		Rru_A1014	0.32	+0.8
1,203,224	+		Rru_A1014	0.32	+1.2
1,203,224	+		Rru_A1014	0.32	-0.0
1,203,224	+		Rru_A1014	0.32	-0.0
1,203,224	+		Rru_A1014	0.32	-0.0
1,203,225	-		Rru_A1014	0.33	+0.8
1,203,225	-		Rru_A1014	0.33	-0.0
1,203,480	-				+0.2
1,203,944	+		Rru_A1015	0.47	-1.0
1,203,944	+		Rru_A1015	0.47	-0.0
1,203,944	+		Rru_A1015	0.47	-0.2
1,203,945	-		Rru_A1015	0.47	-0.4
1,203,945	-		Rru_A1015	0.47	-0.0
1,203,945	-		Rru_A1015	0.47	-0.0