Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1005

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
1,191,042	-		Rru_A1004	0.41	-0.0
1,191,134	+		Rru_A1004	0.50	-1.0
1,191,134	+		Rru_A1004	0.50	+0.2
1,191,135	-		Rru_A1004	0.50	-1.5
1,191,158	+		Rru_A1004	0.52	+0.2
1,191,159	-		Rru_A1004	0.52	-0.0
1,191,198	+		Rru_A1004	0.56	-0.0
1,191,199	-		Rru_A1004	0.56	-0.0
1,191,199	-		Rru_A1004	0.56	-1.0
1,191,275	+		Rru_A1004	0.63	-0.0
1,191,275	+		Rru_A1004	0.63	-0.7
1,191,275	+		Rru_A1004	0.63	-0.0
1,191,278	+		Rru_A1004	0.64	+1.0
1,191,278	+		Rru_A1004	0.64	-0.0
1,191,279	-		Rru_A1004	0.64	+0.5
1,191,459	+		Rru_A1004	0.81	-0.0
1,191,459	+		Rru_A1004	0.81	+0.2
1,191,460	-		Rru_A1004	0.82	-0.0
1,191,460	-		Rru_A1004	0.82	+0.5
1,191,655	+				-1.0
1,191,655	+				-0.0
1,191,656	-				-0.1
1,191,931	+				+0.9
1,193,251	+				-0.6
1,193,251	+				+0.2
1,193,252	-				+0.6
1,193,252	-				-0.0
1,193,353	+		Rru_A1006	0.11	-0.0
1,193,354	-		Rru_A1006	0.11	-0.0
1,193,354	-		Rru_A1006	0.11	-0.0
1,193,395	+		Rru_A1006	0.15	-2.0
1,193,395	+		Rru_A1006	0.15	-0.0
1,193,396	-		Rru_A1006	0.15	-0.0
1,193,443	+		Rru_A1006	0.19	-0.8
1,193,515	-		Rru_A1006	0.26	-1.0
1,193,533	-		Rru_A1006	0.28	+0.5
1,193,590	+		Rru_A1006	0.33	-0.0
1,193,591	-		Rru_A1006	0.33	+0.2
1,193,705	+		Rru_A1006	0.43	-0.0
1,193,706	-		Rru_A1006	0.43	+1.1
1,193,864	+		Rru_A1006	0.58	-0.0
1,193,864	+		Rru_A1006	0.58	-0.4
1,193,865	-		Rru_A1006	0.58	-0.0
1,193,923	+		Rru_A1006	0.63	+0.3
1,193,940	+		Rru_A1006	0.64	-0.0
1,193,941	-		Rru_A1006	0.65	-0.0