Strain Fitness in Rhodospirillum rubrum S1H around Rru_A0991

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
1,178,426	+		Rru_A0990	0.76	+0.6
1,178,426	+		Rru_A0990	0.76	+0.0
1,178,426	+		Rru_A0990	0.76	+0.8
1,178,426	+		Rru_A0990	0.76	+0.1
1,178,426	+		Rru_A0990	0.76	+0.0
1,178,616	+		Rru_A0990	0.84	+0.0
1,178,617	-		Rru_A0990	0.84	-0.1
1,178,850	+				+0.0
1,178,852	+				+0.0
1,178,852	+				+0.0
1,178,852	+				+0.0
1,178,852	+				+0.0
1,178,853	-				+0.4
1,178,853	-				+0.7
1,178,853	-				-1.0
1,178,860	-				+0.0
1,179,043	+				+0.6
1,179,043	+				+0.5
1,179,044	-				-0.0
1,179,052	+				+0.3
1,179,053	-				+0.8
1,179,058	+				+0.0
1,179,059	-				+1.6
1,179,124	+				-1.2
1,179,124	+				+0.0
1,179,125	-				+0.4
1,179,178	+				-0.3
1,179,556	+		Rru_A0991	0.37	-0.1
1,179,556	+		Rru_A0991	0.37	+0.1
1,179,666	+		Rru_A0991	0.53	+0.0
1,179,811	+		Rru_A0991	0.73	+0.0
1,179,811	+		Rru_A0991	0.73	+0.0
1,179,811	+		Rru_A0991	0.73	+0.4
1,179,812	-		Rru_A0991	0.73	-1.0
1,179,812	-		Rru_A0991	0.73	+0.0
1,179,812	-		Rru_A0991	0.73	+0.0
1,179,812	-		Rru_A0991	0.73	-1.8
1,179,812	-		Rru_A0991	0.73	-0.9
1,179,844	+		Rru_A0991	0.77	+0.0
1,179,844	+		Rru_A0991	0.77	+0.9
1,179,845	-		Rru_A0991	0.78	+0.0
1,180,047	+				-0.7
1,180,047	+				+0.0
1,180,048	-				+1.0
1,180,048	-				+0.6
1,180,095	+				+0.8
1,180,095	+				+1.5
1,180,472	+		Rru_A0992	0.72	+1.7
1,180,472	+		Rru_A0992	0.72	+0.0
1,180,472	+		Rru_A0992	0.72	+0.4
1,180,472	+		Rru_A0992	0.72	+0.0
1,180,473	-		Rru_A0992	0.72	-1.0
1,180,473	-		Rru_A0992	0.72	+0.4
1,180,482	-		Rru_A0992	0.75	-0.6
1,180,563	+				-0.3
1,180,563	+				+0.0
1,180,563	+				+1.0
1,180,564	-				+1.1
1,180,564	-				+0.7
1,180,627	+				+0.0
1,180,627	+				+0.0
1,180,667	-				-0.1
1,180,694	+				+0.0
1,180,695	-				+0.2
1,180,695	-				-0.6
1,180,695	-				+0.0
1,180,960	+				+1.5
1,180,960	+				-0.3
1,180,960	+				+0.0
1,180,960	+				+0.4
1,180,961	-				+0.1
1,180,961	-				+0.2
1,180,961	-				+0.0