Strain Fitness in Rhodospirillum rubrum S1H around Rru_A0984

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
1,170,149	+		Rru_A0983	0.45	-0.5
1,170,149	+		Rru_A0983	0.45	-2.0
1,170,150	-		Rru_A0983	0.45	+1.4
1,170,150	-		Rru_A0983	0.45	-0.4
1,170,150	-		Rru_A0983	0.45	+0.2
1,170,494	+		Rru_A0983	0.69	+1.0
1,170,495	-		Rru_A0983	0.69	+0.0
1,170,611	+		Rru_A0983	0.77	+0.6
1,170,734	+		Rru_A0983	0.85	+1.4
1,170,734	+		Rru_A0983	0.85	-0.6
1,170,734	+		Rru_A0983	0.85	+0.0
1,170,735	-		Rru_A0983	0.85	-1.0
1,170,735	-		Rru_A0983	0.85	+0.0
1,170,735	-		Rru_A0983	0.85	-0.5
1,170,890	+				+0.0
1,170,890	+				+2.0
1,170,890	+				+0.0
1,170,891	-				+0.0
1,170,891	-				+1.2
1,170,891	-				+0.2
1,171,027	-				+0.0
1,171,249	+		Rru_A0984	0.24	+0.2
1,171,249	+		Rru_A0984	0.24	+0.5
1,171,300	-		Rru_A0984	0.28	+0.0
1,171,300	-		Rru_A0984	0.28	+0.1
1,171,431	+		Rru_A0984	0.39	+0.0
1,171,456	+		Rru_A0984	0.41	+0.7
1,171,456	+		Rru_A0984	0.41	+1.0
1,171,457	-		Rru_A0984	0.41	+0.0
1,171,457	-		Rru_A0984	0.41	+0.0
1,171,457	-		Rru_A0984	0.41	+0.0
1,171,491	+		Rru_A0984	0.44	+0.0
1,171,491	+		Rru_A0984	0.44	-2.3
1,171,711	+		Rru_A0984	0.62	-0.1
1,171,711	+		Rru_A0984	0.62	+0.0
1,171,712	-		Rru_A0984	0.62	+0.0
1,171,712	-		Rru_A0984	0.62	-1.6
1,171,714	-		Rru_A0984	0.63	-1.0
1,172,014	+		Rru_A0984	0.88	+0.0
1,172,015	-		Rru_A0984	0.88	+1.1
1,172,053	-				+0.3
1,172,053	-				+0.5
1,172,053	-				+0.6
1,172,064	+				+0.0
1,172,065	-				+0.8
1,172,219	+				+0.0
1,172,219	+				+0.2
1,172,219	+				+0.0
1,172,220	-				+0.1
1,172,220	-				-0.3
1,172,225	+				+0.0
1,172,225	+				+0.3
1,172,233	-				+0.0
1,172,263	+				+1.6
1,172,264	-				-0.3
1,172,264	-				+0.6
1,172,264	-				+0.0
1,172,265	+				-1.0
1,172,294	-				+0.5
1,172,294	-				+0.1
1,172,325	-				+0.8
1,172,376	+				-0.6
1,172,519	-		Rru_A0985	0.13	+0.0
1,172,519	-		Rru_A0985	0.13	+0.3
1,172,629	+		Rru_A0985	0.20	+0.0
1,172,629	+		Rru_A0985	0.20	+0.0
1,172,629	+		Rru_A0985	0.20	+0.3
1,172,630	-		Rru_A0985	0.20	+0.5
1,172,739	+		Rru_A0985	0.28	+0.5
1,172,820	+		Rru_A0985	0.33	+0.0
1,172,887	+		Rru_A0985	0.37	-0.9
1,172,888	-		Rru_A0985	0.37	+0.0
1,172,888	-		Rru_A0985	0.37	+0.0
1,172,998	-		Rru_A0985	0.45	+0.2
1,173,037	-		Rru_A0985	0.47	-0.2
1,173,037	-		Rru_A0985	0.47	+1.2
1,173,037	-		Rru_A0985	0.47	-0.4
1,173,082	+		Rru_A0985	0.50	+0.0
1,173,082	+		Rru_A0985	0.50	+0.5
1,173,083	-		Rru_A0985	0.50	-1.0
1,173,083	-		Rru_A0985	0.50	+0.9
1,173,103	+		Rru_A0985	0.51	+0.5
1,173,103	+		Rru_A0985	0.51	+0.0