Strain Fitness in Rhodospirillum rubrum S1H around Rru_A0983

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
1,168,626	+		Rru_A0982	0.47	+0.0
1,168,626	+		Rru_A0982	0.47	+0.0
1,168,627	-		Rru_A0982	0.47	+1.3
1,168,628	+		Rru_A0982	0.47	+0.5
1,168,628	+		Rru_A0982	0.47	+0.7
1,168,628	+		Rru_A0982	0.47	+1.6
1,168,629	-		Rru_A0982	0.47	+0.4
1,168,696	-		Rru_A0982	0.51	+1.2
1,168,898	+		Rru_A0982	0.64	+0.8
1,168,898	+		Rru_A0982	0.64	+0.0
1,168,898	+		Rru_A0982	0.64	-0.6
1,168,899	-		Rru_A0982	0.64	+0.0
1,169,367	+				+0.0
1,169,367	+				-0.4
1,169,367	+				+0.0
1,169,367	+				+0.5
1,169,367	+				+1.1
1,169,368	-				+0.0
1,169,368	-				-1.0
1,169,431	-				+0.9
1,169,433	-				+0.6
1,169,433	-				+0.0
1,169,515	+				+0.6
1,169,912	+		Rru_A0983	0.29	+0.0
1,169,912	+		Rru_A0983	0.29	+1.3
1,169,912	+		Rru_A0983	0.29	+0.0
1,169,912	+		Rru_A0983	0.29	+0.0
1,169,912	+		Rru_A0983	0.29	+0.0
1,169,913	-		Rru_A0983	0.29	+0.0
1,169,913	-		Rru_A0983	0.29	+0.0
1,169,913	-		Rru_A0983	0.29	+0.0
1,169,913	-		Rru_A0983	0.29	+0.0
1,169,913	-		Rru_A0983	0.29	+0.6
1,169,913	-		Rru_A0983	0.29	+0.4
1,169,914	+		Rru_A0983	0.29	+0.0
1,169,915	-		Rru_A0983	0.29	+0.6
1,169,945	+		Rru_A0983	0.31	+0.0
1,169,946	-		Rru_A0983	0.31	+1.6
1,170,149	+		Rru_A0983	0.45	-0.5
1,170,149	+		Rru_A0983	0.45	-2.0
1,170,150	-		Rru_A0983	0.45	+1.4
1,170,150	-		Rru_A0983	0.45	-0.4
1,170,150	-		Rru_A0983	0.45	+0.2
1,170,494	+		Rru_A0983	0.69	+1.0
1,170,495	-		Rru_A0983	0.69	+0.0
1,170,611	+		Rru_A0983	0.77	+0.6
1,170,734	+		Rru_A0983	0.85	+1.4
1,170,734	+		Rru_A0983	0.85	-0.6
1,170,734	+		Rru_A0983	0.85	+0.0
1,170,735	-		Rru_A0983	0.85	-1.0
1,170,735	-		Rru_A0983	0.85	+0.0
1,170,735	-		Rru_A0983	0.85	-0.5
1,170,890	+				+0.0
1,170,890	+				+2.0
1,170,890	+				+0.0
1,170,891	-				+0.0
1,170,891	-				+1.2
1,170,891	-				+0.2
1,171,027	-				+0.0
1,171,249	+		Rru_A0984	0.24	+0.2
1,171,249	+		Rru_A0984	0.24	+0.5
1,171,300	-		Rru_A0984	0.28	+0.0
1,171,300	-		Rru_A0984	0.28	+0.1
1,171,431	+		Rru_A0984	0.39	+0.0
1,171,456	+		Rru_A0984	0.41	+0.7
1,171,456	+		Rru_A0984	0.41	+1.0
1,171,457	-		Rru_A0984	0.41	+0.0
1,171,457	-		Rru_A0984	0.41	+0.0
1,171,457	-		Rru_A0984	0.41	+0.0
1,171,491	+		Rru_A0984	0.44	+0.0
1,171,491	+		Rru_A0984	0.44	-2.3
1,171,711	+		Rru_A0984	0.62	-0.1
1,171,711	+		Rru_A0984	0.62	+0.0
1,171,712	-		Rru_A0984	0.62	+0.0
1,171,712	-		Rru_A0984	0.62	-1.6
1,171,714	-		Rru_A0984	0.63	-1.0