Strain Fitness in Rhodospirillum rubrum S1H around Rru_A0981

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
1,166,396	-		Rru_A0980	0.47	+0.0
1,166,449	+		Rru_A0980	0.53	+0.0
1,166,449	+		Rru_A0980	0.53	+0.0
1,166,449	+		Rru_A0980	0.53	+0.3
1,166,449	+		Rru_A0980	0.53	+0.0
1,166,450	-		Rru_A0980	0.53	+0.0
1,166,524	+		Rru_A0980	0.61	+0.5
1,166,524	+		Rru_A0980	0.61	+0.0
1,166,524	+		Rru_A0980	0.61	-1.4
1,166,525	-		Rru_A0980	0.61	+0.0
1,166,525	-		Rru_A0980	0.61	+0.0
1,166,525	-		Rru_A0980	0.61	+0.0
1,166,525	-		Rru_A0980	0.61	+0.3
1,166,525	-		Rru_A0980	0.61	+0.9
1,166,525	-		Rru_A0980	0.61	+0.5
1,166,525	-		Rru_A0980	0.61	+0.0
1,166,584	+		Rru_A0980	0.67	+0.0
1,166,585	-		Rru_A0980	0.67	-0.2
1,166,827	+				-0.1
1,166,828	-				+0.2
1,166,828	-				+0.2
1,166,860	+				-0.2
1,166,861	-				+0.0
1,166,861	-				+0.0
1,166,861	-				+0.2
1,166,893	+				+0.4
1,166,893	+				-0.1
1,166,894	-				-0.1
1,166,990	-				+0.6
1,167,338	+		Rru_A0981	0.45	+0.2
1,167,339	-		Rru_A0981	0.45	+1.4
1,167,519	+		Rru_A0981	0.64	+0.1
1,167,519	+		Rru_A0981	0.64	+0.0
1,167,520	-		Rru_A0981	0.64	+0.0
1,167,520	-		Rru_A0981	0.64	-0.2
1,167,575	+		Rru_A0981	0.70	+0.2
1,167,576	-		Rru_A0981	0.70	+0.0
1,167,576	-		Rru_A0981	0.70	+0.1
1,167,618	+		Rru_A0981	0.75	+0.8
1,167,618	+		Rru_A0981	0.75	+0.0
1,167,618	+		Rru_A0981	0.75	+0.3
1,167,618	+		Rru_A0981	0.75	+0.4
1,167,618	+		Rru_A0981	0.75	+0.0
1,167,618	+		Rru_A0981	0.75	+0.0
1,167,619	-		Rru_A0981	0.75	+0.4
1,167,619	-		Rru_A0981	0.75	+0.0
1,167,619	-		Rru_A0981	0.75	+0.0
1,167,619	-		Rru_A0981	0.75	+0.4
1,167,619	-		Rru_A0981	0.75	+0.0
1,167,619	-		Rru_A0981	0.75	+0.0
1,167,619	-		Rru_A0981	0.75	-3.6
1,167,704	+		Rru_A0981	0.84	+0.0
1,167,704	+		Rru_A0981	0.84	+0.0
1,167,704	+		Rru_A0981	0.84	+0.0
1,167,705	-		Rru_A0981	0.84	+0.0
1,167,705	-		Rru_A0981	0.84	+0.2
1,167,705	-		Rru_A0981	0.84	-0.2
1,167,705	-		Rru_A0981	0.84	+0.0
1,167,705	-		Rru_A0981	0.84	-0.6
1,167,732	-		Rru_A0981	0.87	-0.5
1,167,739	-		Rru_A0981	0.87	+0.2
1,168,320	+		Rru_A0982	0.28	+0.2
1,168,320	+		Rru_A0982	0.28	+0.0
1,168,320	+		Rru_A0982	0.28	+0.0
1,168,320	+		Rru_A0982	0.28	-0.7
1,168,320	+		Rru_A0982	0.28	+1.0
1,168,320	+		Rru_A0982	0.28	-0.2
1,168,321	-		Rru_A0982	0.28	+0.3
1,168,321	-		Rru_A0982	0.28	+0.9
1,168,321	-		Rru_A0982	0.28	+0.0
1,168,321	-		Rru_A0982	0.28	+0.4
1,168,321	-		Rru_A0982	0.28	+0.0
1,168,321	-		Rru_A0982	0.28	-0.5
1,168,329	+		Rru_A0982	0.29	+0.4
1,168,330	-		Rru_A0982	0.29	+0.5
1,168,626	+		Rru_A0982	0.47	+0.0
1,168,626	+		Rru_A0982	0.47	+0.0
1,168,627	-		Rru_A0982	0.47	+1.3
1,168,628	+		Rru_A0982	0.47	+0.5
1,168,628	+		Rru_A0982	0.47	+0.7
1,168,628	+		Rru_A0982	0.47	+1.6
1,168,629	-		Rru_A0982	0.47	+0.4
1,168,696	-		Rru_A0982	0.51	+1.2