Strain Fitness in Rhodospirillum rubrum S1H around Rru_A0972

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
1,156,463	-		Rru_A0971	0.34	+0.2
1,156,463	-		Rru_A0971	0.34	+0.0
1,156,880	-		Rru_A0971	0.59	+0.0
1,157,249	-		Rru_A0971	0.82	+0.0
1,157,249	-		Rru_A0971	0.82	+0.0
1,157,275	-		Rru_A0971	0.83	+1.6
1,157,676	+		Rru_A0972	0.24	-0.3
1,157,783	+		Rru_A0972	0.36	+0.0
1,157,783	+		Rru_A0972	0.36	+0.3
1,157,783	+		Rru_A0972	0.36	-0.3
1,157,784	-		Rru_A0972	0.36	+0.6
1,157,784	-		Rru_A0972	0.36	+0.0
1,157,784	-		Rru_A0972	0.36	-1.6
1,157,784	-		Rru_A0972	0.36	+0.0
1,157,784	-		Rru_A0972	0.36	+0.0
1,157,784	-		Rru_A0972	0.36	+0.6
1,157,784	-		Rru_A0972	0.36	+0.0
1,157,784	-		Rru_A0972	0.36	+0.7
1,157,784	-		Rru_A0972	0.36	+0.0
1,158,027	+		Rru_A0972	0.61	+0.0
1,158,027	+		Rru_A0972	0.61	-0.6
1,158,028	-		Rru_A0972	0.61	+0.4
1,158,504	-				+0.0
1,158,518	+				-0.1
1,158,521	+				+0.0
1,158,521	+				-1.0
1,158,521	+				+0.6
1,158,521	+				+0.3
1,158,521	+				+0.4
1,158,521	+				+0.0
1,158,521	+				+1.7
1,158,522	-				+0.2
1,158,522	-				+0.1
1,158,522	-				+0.5
1,158,522	-				+0.4
1,158,711	-				+0.8
1,158,756	+				+0.2
1,158,756	+				-0.7
1,158,756	+				+0.4
1,158,756	+				+0.7
1,158,756	+				+0.2
1,158,756	+				+0.0
1,158,757	-				+0.6
1,158,757	-				+0.2
1,158,757	-				+0.0
1,158,757	-				+0.0
1,158,853	+		Rru_A0973	0.27	+0.0
1,158,910	-		Rru_A0973	0.40	-0.2
1,158,997	+		Rru_A0973	0.61	+0.9
1,158,997	+		Rru_A0973	0.61	+0.3
1,158,997	+		Rru_A0973	0.61	+0.5
1,158,998	-		Rru_A0973	0.61	+0.0
1,159,159	+				-0.1
1,159,160	-				-1.0
1,159,225	+				+1.4
1,159,227	+				+0.0
1,159,227	+				+1.1
1,159,227	+				+0.5
1,159,227	+				-1.4
1,159,227	+				+0.3
1,159,227	+				+0.0
1,159,227	+				+0.9
1,159,227	+				+0.0
1,159,227	+				+0.6
1,159,227	+				+0.8
1,159,227	+				+0.0
1,159,227	+				+0.5
1,159,228	-				-0.1
1,159,228	-				+1.3
1,159,228	-				+0.0
1,159,228	-				+0.9
1,159,228	-				+0.0
1,159,228	-				+0.0
1,159,228	-				+1.6
1,159,228	-				+0.1
1,159,228	-				+0.0