Strain Fitness in Rhodospirillum rubrum S1H around Rru_A0968

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
1,152,177	+				+1.4
1,152,177	+				-0.5
1,152,215	+				+0.5
1,152,215	+				+0.0
1,152,215	+				+0.0
1,152,215	+				+0.0
1,152,215	+				+0.6
1,152,215	+				+0.5
1,152,215	+				+0.4
1,152,216	-				+0.3
1,152,216	-				+0.2
1,152,216	-				+0.0
1,152,216	-				+0.0
1,152,216	-				+0.0
1,152,216	-				+0.0
1,152,216	-				+0.0
1,152,216	-				+0.8
1,152,216	-				+0.0
1,152,216	-				+0.3
1,152,219	+				+0.0
1,152,220	-				+0.0
1,152,220	-				-0.7
1,152,220	-				+0.8
1,152,220	-				+0.0
1,152,220	-				+0.3
1,152,220	-				+1.0
1,152,220	-				+0.0
1,152,231	+				+0.0
1,152,231	+				-0.1
1,152,733	-		Rru_A0967	0.65	+0.7
1,153,098	-				+0.0
1,153,250	+		Rru_A0968	0.25	+0.4
1,153,250	+		Rru_A0968	0.25	+1.3
1,153,250	+		Rru_A0968	0.25	+0.8
1,153,250	+		Rru_A0968	0.25	+0.7
1,153,251	-		Rru_A0968	0.26	+0.2
1,153,251	-		Rru_A0968	0.26	+0.5
1,153,251	-		Rru_A0968	0.26	-1.0
1,153,251	-		Rru_A0968	0.26	-0.1
1,153,251	-		Rru_A0968	0.26	+0.0
1,153,281	-		Rru_A0968	0.29	-1.0
1,153,622	+		Rru_A0968	0.65	-0.2
1,153,623	-		Rru_A0968	0.65	+0.7
1,153,623	-		Rru_A0968	0.65	+0.5
1,153,810	+		Rru_A0968	0.85	+0.2
1,153,810	+		Rru_A0968	0.85	+1.5
1,153,811	-		Rru_A0968	0.85	+0.7
1,153,811	-		Rru_A0968	0.85	-1.0
1,153,811	-		Rru_A0968	0.85	+0.0
1,153,865	+				+0.7
1,153,865	+				+0.6
1,153,865	+				+0.4
1,153,866	-				+0.6
1,153,866	-				-0.2
1,153,866	-				+1.3
1,154,022	+				+0.7
1,154,137	+		Rru_A0969	0.15	-0.3
1,154,138	-		Rru_A0969	0.15	+0.0
1,154,138	-		Rru_A0969	0.15	+0.0
1,154,138	-		Rru_A0969	0.15	+0.2
1,154,450	-		Rru_A0969	0.39	-0.5
1,154,674	+		Rru_A0969	0.57	+0.7