Strain Fitness in Rhodospirillum rubrum S1H around Rru_A0967

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
1,151,417	+		Rru_A0966	0.68	+0.0
1,151,417	+		Rru_A0966	0.68	+0.7
1,151,418	-		Rru_A0966	0.68	+0.3
1,151,418	-		Rru_A0966	0.68	+0.5
1,151,418	-		Rru_A0966	0.68	+0.0
1,151,418	-		Rru_A0966	0.68	+0.0
1,151,442	+		Rru_A0966	0.69	-1.0
1,151,442	+		Rru_A0966	0.69	+0.0
1,151,442	+		Rru_A0966	0.69	-1.0
1,151,442	+		Rru_A0966	0.69	+0.6
1,151,443	-		Rru_A0966	0.69	+1.1
1,151,443	-		Rru_A0966	0.69	+2.6
1,151,443	-		Rru_A0966	0.69	+0.0
1,151,443	-		Rru_A0966	0.69	+1.5
1,151,634	+		Rru_A0966	0.77	+0.8
1,151,634	+		Rru_A0966	0.77	+0.0
1,151,635	-		Rru_A0966	0.77	+0.7
1,151,635	-		Rru_A0966	0.77	+0.0
1,151,635	-		Rru_A0966	0.77	+1.2
1,151,635	-		Rru_A0966	0.77	+0.5
1,151,694	+		Rru_A0966	0.80	+0.0
1,151,695	-		Rru_A0966	0.80	+0.1
1,151,695	-		Rru_A0966	0.80	+0.6
1,151,716	-		Rru_A0966	0.81	+0.3
1,151,767	+		Rru_A0966	0.83	+0.5
1,151,768	-		Rru_A0966	0.83	-0.4
1,151,895	+		Rru_A0966	0.88	+0.0
1,151,895	+		Rru_A0966	0.88	+0.1
1,151,937	+		Rru_A0966	0.90	+0.0
1,151,937	+		Rru_A0966	0.90	+1.5
1,151,938	-				+0.0
1,151,938	-				+0.0
1,152,005	+				+0.0
1,152,177	+				+1.4
1,152,177	+				-0.5
1,152,215	+				+0.5
1,152,215	+				+0.0
1,152,215	+				+0.0
1,152,215	+				+0.0
1,152,215	+				+0.6
1,152,215	+				+0.5
1,152,215	+				+0.4
1,152,216	-				+0.3
1,152,216	-				+0.2
1,152,216	-				+0.0
1,152,216	-				+0.0
1,152,216	-				+0.0
1,152,216	-				+0.0
1,152,216	-				+0.0
1,152,216	-				+0.8
1,152,216	-				+0.0
1,152,216	-				+0.3
1,152,219	+				+0.0
1,152,220	-				+0.0
1,152,220	-				-0.7
1,152,220	-				+0.8
1,152,220	-				+0.0
1,152,220	-				+0.3
1,152,220	-				+1.0
1,152,220	-				+0.0
1,152,231	+				+0.0
1,152,231	+				-0.1
1,152,733	-		Rru_A0967	0.65	+0.7
1,153,098	-				+0.0
1,153,250	+		Rru_A0968	0.25	+0.4
1,153,250	+		Rru_A0968	0.25	+1.3
1,153,250	+		Rru_A0968	0.25	+0.8
1,153,250	+		Rru_A0968	0.25	+0.7
1,153,251	-		Rru_A0968	0.26	+0.2
1,153,251	-		Rru_A0968	0.26	+0.5
1,153,251	-		Rru_A0968	0.26	-1.0
1,153,251	-		Rru_A0968	0.26	-0.1
1,153,251	-		Rru_A0968	0.26	+0.0
1,153,281	-		Rru_A0968	0.29	-1.0
1,153,622	+		Rru_A0968	0.65	-0.2
1,153,623	-		Rru_A0968	0.65	+0.7
1,153,623	-		Rru_A0968	0.65	+0.5
1,153,810	+		Rru_A0968	0.85	+0.2
1,153,810	+		Rru_A0968	0.85	+1.5
1,153,811	-		Rru_A0968	0.85	+0.7
1,153,811	-		Rru_A0968	0.85	-1.0
1,153,811	-		Rru_A0968	0.85	+0.0
1,153,865	+				+0.7
1,153,865	+				+0.6
1,153,865	+				+0.4
1,153,866	-				+0.6
1,153,866	-				-0.2
1,153,866	-				+1.3