Strain Fitness in Rhodospirillum rubrum S1H around Rru_A0965

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
1,148,354	+		Rru_A0963	0.46	-0.9
1,148,454	-		Rru_A0963	0.68	-2.6
1,148,454	-		Rru_A0963	0.68	-1.1
1,148,979	+				+0.1
1,149,035	-				+0.0
1,149,035	-				-2.0
1,149,180	+				+0.4
1,149,181	-				-0.3
1,149,181	-				+0.0
1,149,221	-				+0.9
1,149,221	-				-0.2
1,149,221	-				-0.7
1,149,350	+		Rru_A0965	0.31	+1.4
1,149,351	-		Rru_A0965	0.31	+0.0
1,149,351	-		Rru_A0965	0.31	+0.0
1,149,351	-		Rru_A0965	0.31	-2.1
1,149,351	-		Rru_A0965	0.31	+0.0
1,149,513	-		Rru_A0965	0.63	+1.1
1,149,629	+		Rru_A0965	0.87	+0.3
1,149,629	+		Rru_A0965	0.87	+0.4
1,149,763	-				+0.0
1,149,763	-				+0.6
1,149,767	+				+0.3
1,149,768	-				+0.6
1,149,768	-				+0.6
1,149,832	+				+0.0
1,149,832	+				+0.0
1,149,882	+				+0.3
1,149,882	+				+0.0
1,149,882	+				+0.0
1,149,882	+				+0.9
1,149,883	-				+0.0
1,149,883	-				+1.4
1,149,883	-				+0.5
1,149,883	-				+0.7
1,149,883	-				+0.0
1,149,883	-				+1.0
1,149,884	+				+1.0
1,149,894	-				+1.5
1,150,073	+		Rru_A0966	0.13	+0.5
1,150,073	+		Rru_A0966	0.13	-0.8
1,150,074	-		Rru_A0966	0.13	+0.5
1,150,074	-		Rru_A0966	0.13	+0.0
1,150,215	+		Rru_A0966	0.19	+0.0
1,150,215	+		Rru_A0966	0.19	-0.1
1,150,299	+		Rru_A0966	0.22	+0.0
1,150,299	+		Rru_A0966	0.22	+0.0
1,150,299	+		Rru_A0966	0.22	+0.0
1,150,300	-		Rru_A0966	0.22	+0.7
1,150,300	-		Rru_A0966	0.22	+0.0
1,150,300	-		Rru_A0966	0.22	-0.5
1,150,300	-		Rru_A0966	0.22	+0.0
1,150,300	-		Rru_A0966	0.22	+1.6
1,150,419	+		Rru_A0966	0.27	+0.6
1,150,419	+		Rru_A0966	0.27	+0.4
1,150,419	+		Rru_A0966	0.27	+0.4
1,150,419	+		Rru_A0966	0.27	+1.0
1,150,420	-		Rru_A0966	0.27	+0.0
1,150,420	-		Rru_A0966	0.27	+0.6
1,150,420	-		Rru_A0966	0.27	+0.2
1,150,420	-		Rru_A0966	0.27	-1.0
1,150,420	-		Rru_A0966	0.27	+0.0
1,150,421	+		Rru_A0966	0.27	+0.0
1,150,422	-		Rru_A0966	0.27	+1.2
1,150,452	+		Rru_A0966	0.28	+0.3
1,150,452	+		Rru_A0966	0.28	+0.0
1,150,452	+		Rru_A0966	0.28	+0.5
1,150,452	+		Rru_A0966	0.28	+0.0
1,150,453	-		Rru_A0966	0.28	-0.1
1,150,453	-		Rru_A0966	0.28	+0.9
1,150,453	-		Rru_A0966	0.28	+1.2
1,150,453	-		Rru_A0966	0.28	+0.1
1,150,453	-		Rru_A0966	0.28	+0.0
1,150,453	-		Rru_A0966	0.28	+0.4
1,150,584	+		Rru_A0966	0.34	+0.0
1,150,584	+		Rru_A0966	0.34	+0.0
1,150,584	+		Rru_A0966	0.34	+0.2
1,150,585	-		Rru_A0966	0.34	-0.4
1,150,585	-		Rru_A0966	0.34	+0.6
1,150,585	-		Rru_A0966	0.34	+0.0
1,150,585	-		Rru_A0966	0.34	-0.1
1,150,585	-		Rru_A0966	0.34	+0.1
1,150,590	+		Rru_A0966	0.34	-1.0
1,150,590	+		Rru_A0966	0.34	+0.0