Strain Fitness in Rhodospirillum rubrum S1H around Rru_A0960

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
1,145,191	-				+0.0
1,145,191	-				-0.3
1,145,196	-				-1.6
1,146,010	+		Rru_A0960	0.18	+0.0
1,146,016	-		Rru_A0960	0.18	-0.1
1,146,016	-		Rru_A0960	0.18	-0.7
1,146,021	-		Rru_A0960	0.19	-1.0
1,146,400	+		Rru_A0960	0.71	+0.0
1,146,400	+		Rru_A0960	0.71	-1.1
1,146,400	+		Rru_A0960	0.71	-1.0
1,146,400	+		Rru_A0960	0.71	+0.0
1,146,400	+		Rru_A0960	0.71	-0.5
1,146,400	+		Rru_A0960	0.71	+0.0
1,146,400	+		Rru_A0960	0.71	+0.0
1,146,400	+		Rru_A0960	0.71	-1.2
1,146,401	-		Rru_A0960	0.71	+0.0
1,146,401	-		Rru_A0960	0.71	-0.2
1,146,401	-		Rru_A0960	0.71	-0.5
1,146,401	-		Rru_A0960	0.71	+0.0
1,146,402	+		Rru_A0960	0.72	-0.3
1,146,402	+		Rru_A0960	0.72	+0.0
1,146,402	+		Rru_A0960	0.72	+0.0
1,146,402	+		Rru_A0960	0.72	-1.0
1,146,403	-		Rru_A0960	0.72	-2.0
1,146,403	-		Rru_A0960	0.72	-0.4
1,146,501	+		Rru_A0960	0.85	-0.7
1,146,502	-		Rru_A0960	0.85	-0.1
1,146,502	-		Rru_A0960	0.85	-0.2
1,146,502	-		Rru_A0960	0.85	-0.6
1,146,648	+				+1.0
1,146,649	-				+0.0
1,147,017	+		Rru_A0961	0.52	+0.0
1,147,017	+		Rru_A0961	0.52	-2.5
1,147,017	+		Rru_A0961	0.52	-1.0
1,147,241	+		Rru_A0961	0.81	+0.0
1,147,241	+		Rru_A0961	0.81	-0.4
1,147,242	-		Rru_A0961	0.81	+0.1
1,147,293	+		Rru_A0961	0.88	-0.6
1,147,293	+		Rru_A0961	0.88	+0.0
1,147,293	+		Rru_A0961	0.88	+0.0
1,147,294	-		Rru_A0961	0.88	+0.0
1,147,387	+				-0.4
1,147,388	-				+0.0
1,147,523	-				+0.2