Strain Fitness in Rhodospirillum rubrum S1H around Rru_A0920

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
1,093,659	+		Rru_A0919	0.40	+0.0
1,093,660	-		Rru_A0919	0.40	-0.6
1,093,660	-		Rru_A0919	0.40	+0.3
1,093,938	-		Rru_A0919	0.66	+0.2
1,093,962	-		Rru_A0919	0.69	-1.4
1,094,035	+		Rru_A0919	0.75	+0.0
1,094,080	-		Rru_A0919	0.80	+0.0
1,094,080	-		Rru_A0919	0.80	+0.0
1,094,181	+		Rru_A0919	0.89	+1.1
1,094,181	+		Rru_A0919	0.89	+0.3
1,094,182	-		Rru_A0919	0.89	-1.7
1,094,182	-		Rru_A0919	0.89	+1.2
1,094,462	+				-1.3
1,094,619	+				+0.0
1,094,678	+				+0.0
1,094,687	+				+0.2
1,094,688	-				+0.2
1,094,688	-				+0.0
1,094,689	+				+0.0
1,094,689	+				+0.7
1,094,923	+		Rru_A0920	0.23	+0.4
1,095,001	+		Rru_A0920	0.29	+0.7
1,095,022	+		Rru_A0920	0.31	+0.0
1,095,134	+		Rru_A0920	0.40	+0.5
1,095,135	-		Rru_A0920	0.40	+0.0
1,095,135	-		Rru_A0920	0.40	+0.5
1,095,135	-		Rru_A0920	0.40	-1.3
1,095,137	+		Rru_A0920	0.40	+0.0
1,095,188	+		Rru_A0920	0.44	+0.3
1,095,189	-		Rru_A0920	0.44	+0.0
1,095,386	+		Rru_A0920	0.60	+0.0
1,095,386	+		Rru_A0920	0.60	+1.4
1,095,386	+		Rru_A0920	0.60	+1.2
1,095,386	+		Rru_A0920	0.60	+0.0
1,095,386	+		Rru_A0920	0.60	+0.7
1,095,386	+		Rru_A0920	0.60	+0.2
1,095,386	+		Rru_A0920	0.60	+0.2
1,095,387	-		Rru_A0920	0.60	+0.0
1,095,387	-		Rru_A0920	0.60	-0.3
1,095,437	+		Rru_A0920	0.64	+1.2
1,095,437	+		Rru_A0920	0.64	+0.8
1,095,551	+		Rru_A0920	0.73	+0.2
1,095,552	-		Rru_A0920	0.73	+0.0
1,095,552	-		Rru_A0920	0.73	+1.5
1,095,552	-		Rru_A0920	0.73	+0.0
1,095,553	+		Rru_A0920	0.73	+0.8
1,095,553	+		Rru_A0920	0.73	-1.4
1,095,554	-		Rru_A0920	0.73	-2.3
1,095,554	-		Rru_A0920	0.73	+0.0
1,095,554	-		Rru_A0920	0.73	+0.0
1,095,579	-		Rru_A0920	0.76	-1.0
1,095,579	-		Rru_A0920	0.76	+1.0
1,095,644	+		Rru_A0920	0.81	+0.0
1,095,644	+		Rru_A0920	0.81	-0.1
1,095,644	+		Rru_A0920	0.81	+1.0
1,095,645	-		Rru_A0920	0.81	+0.1
1,095,645	-		Rru_A0920	0.81	+0.0
1,095,646	+		Rru_A0920	0.81	+1.0
1,095,646	+		Rru_A0920	0.81	+0.0
1,095,658	+		Rru_A0920	0.82	+0.8
1,095,658	+		Rru_A0920	0.82	+1.9
1,095,857	+				+0.0
1,095,882	-				+0.0
1,096,004	+				+0.0
1,096,296	+				+0.0
1,096,297	-				+0.8
1,096,297	-				+0.4
1,096,297	-				+0.9
1,096,297	-				+0.7
1,096,297	-				+0.0
1,096,526	-		Rru_A0922	0.65	+0.3
1,096,674	-				+0.7
1,096,674	-				+0.1
1,096,674	-				+1.1
1,096,674	-				+0.0
1,096,674	-				+0.2
1,096,674	-				-1.0
1,096,674	-				+0.0
1,096,740	-				+0.0
1,096,740	-				+0.0
1,096,753	-				-0.1
1,096,827	-				+0.6