Strain Fitness in Rhodospirillum rubrum S1H around Rru_A0909

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
1,083,422	+		Rru_A0907	0.15	+0.0
1,083,965	-				+1.6
1,084,016	+				+0.0
1,084,038	-		Rru_A0908	0.15	+0.6
1,084,038	-		Rru_A0908	0.15	+0.0
1,084,339	+				-1.0
1,084,340	-				+1.1
1,084,340	-				+0.0
1,084,363	-				-0.5
1,084,363	-				-0.4
1,084,477	+		Rru_A0909	0.15	-0.4
1,084,477	+		Rru_A0909	0.15	+0.7
1,084,478	-		Rru_A0909	0.15	+0.0
1,084,478	-		Rru_A0909	0.15	+1.0
1,085,015	+		Rru_A0909	0.89	-0.8
1,085,015	+		Rru_A0909	0.89	+0.9
1,085,016	-		Rru_A0909	0.89	+0.1
1,085,016	-		Rru_A0909	0.89	+0.4
1,085,026	+				-1.0
1,085,026	+				+0.0
1,085,027	-				+0.0
1,085,027	-				+0.9
1,085,256	-		Rru_A0910	0.14	-0.7
1,085,264	+		Rru_A0910	0.15	+0.4
1,085,264	+		Rru_A0910	0.15	+0.0
1,085,355	+		Rru_A0910	0.26	+0.1
1,085,355	+		Rru_A0910	0.26	+0.6
1,085,356	-		Rru_A0910	0.26	+0.0
1,085,610	-		Rru_A0910	0.56	+0.0
1,085,666	+		Rru_A0910	0.62	+1.3
1,085,667	-		Rru_A0910	0.62	+0.7
1,085,667	-		Rru_A0910	0.62	-1.0
1,085,817	+		Rru_A0910	0.80	+0.0
1,085,835	+		Rru_A0910	0.82	+1.0
1,085,835	+		Rru_A0910	0.82	-0.0
1,085,835	+		Rru_A0910	0.82	-1.1
1,085,836	-		Rru_A0910	0.82	+0.1
1,085,836	-		Rru_A0910	0.82	+0.4
1,085,955	+				+0.0
1,085,955	+				+0.6
1,085,955	+				+0.0
1,085,955	+				+0.0
1,085,955	+				+0.0
1,085,955	+				+0.2
1,085,955	+				+0.0
1,085,983	+				+0.5