Strain Fitness in Rhodospirillum rubrum S1H around Rru_A0901

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
1,074,963	+		Rru_A0899	0.84	+0.5
1,074,964	-		Rru_A0899	0.84	+1.0
1,074,964	-		Rru_A0899	0.84	+0.0
1,074,964	-		Rru_A0899	0.84	+0.6
1,074,964	-		Rru_A0899	0.84	+0.4
1,074,965	+		Rru_A0899	0.84	+0.6
1,074,965	+		Rru_A0899	0.84	+0.0
1,074,965	+		Rru_A0899	0.84	+0.5
1,075,007	+		Rru_A0899	0.88	+0.0
1,075,007	+		Rru_A0899	0.88	+1.0
1,075,007	+		Rru_A0899	0.88	-1.6
1,075,008	-		Rru_A0899	0.88	+0.2
1,075,106	+				+0.7
1,075,106	+				+0.0
1,075,107	-				+1.0
1,075,225	+		Rru_A0900	0.12	+0.0
1,075,474	+		Rru_A0900	0.44	+0.3
1,075,475	-		Rru_A0900	0.44	+1.5
1,075,475	-		Rru_A0900	0.44	+0.6
1,075,992	+				+0.3
1,075,992	+				-1.0
1,076,013	+				+0.0
1,076,014	-		Rru_A0901	0.10	+0.6
1,076,034	+		Rru_A0901	0.12	+0.7
1,076,061	+		Rru_A0901	0.14	+1.2
1,076,061	+		Rru_A0901	0.14	+1.5
1,076,061	+		Rru_A0901	0.14	-1.0
1,076,062	-		Rru_A0901	0.14	+1.5
1,076,383	+		Rru_A0901	0.42	+0.5
1,076,383	+		Rru_A0901	0.42	+0.0
1,076,383	+		Rru_A0901	0.42	+0.4
1,076,384	-		Rru_A0901	0.42	+1.1
1,076,384	-		Rru_A0901	0.42	+0.4
1,076,385	+		Rru_A0901	0.42	+1.0
1,077,210	+				+0.0
1,077,260	-				-2.0
1,077,264	+				-1.0
1,077,265	-				-1.0
1,077,265	-				-1.3
1,077,552	-				+0.0
1,077,695	+		Rru_A0902	0.17	+0.0
1,077,766	+		Rru_A0902	0.29	+0.0
1,077,766	+		Rru_A0902	0.29	-0.4
1,077,766	+		Rru_A0902	0.29	+0.0
1,077,767	-		Rru_A0902	0.29	-1.2
1,077,767	-		Rru_A0902	0.29	+0.3
1,077,767	-		Rru_A0902	0.29	-0.6
1,077,767	-		Rru_A0902	0.29	-0.4
1,077,845	-		Rru_A0902	0.43	-0.9
1,078,006	+		Rru_A0902	0.71	-2.7
1,078,048	+		Rru_A0902	0.78	-1.6
1,078,048	+		Rru_A0902	0.78	+0.0
1,078,049	-		Rru_A0902	0.78	+0.3
1,078,049	-		Rru_A0902	0.78	-0.8
1,078,049	-		Rru_A0902	0.78	+0.0
1,078,049	-		Rru_A0902	0.78	+0.3