Strain Fitness in Rhodospirillum rubrum S1H around Rru_A0873

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
1,042,742	+		Rru_A0871	0.71	+1.6
1,042,743	-		Rru_A0871	0.71	-1.0
1,042,890	-				-0.1
1,042,890	-				-0.0
1,042,890	-				-1.6
1,042,910	+				-0.0
1,042,910	+				+0.6
1,042,911	-				-0.0
1,042,939	-				+0.2
1,042,939	-				-0.0
1,043,133	-		Rru_A0872	0.30	-0.0
1,043,415	+		Rru_A0872	0.74	-0.2
1,043,546	-				+1.2
1,043,546	-				+0.6
1,043,663	-				+1.0
1,043,696	+				+0.7
1,043,697	-				+0.1
1,043,801	-		Rru_A0873	0.13	-0.0
1,043,910	+		Rru_A0873	0.20	+0.1
1,043,911	-		Rru_A0873	0.20	-0.0
1,043,913	+		Rru_A0873	0.21	-0.0
1,043,913	+		Rru_A0873	0.21	+0.3
1,043,913	+		Rru_A0873	0.21	-0.0
1,043,913	+		Rru_A0873	0.21	-0.0
1,043,914	-		Rru_A0873	0.21	-2.3
1,043,914	-		Rru_A0873	0.21	-1.0
1,043,914	-		Rru_A0873	0.21	-0.0
1,043,914	-		Rru_A0873	0.21	-0.0
1,043,914	-		Rru_A0873	0.21	+0.1
1,043,919	+		Rru_A0873	0.21	-0.0
1,043,920	-		Rru_A0873	0.21	-0.2
1,044,027	+		Rru_A0873	0.28	-0.0
1,044,028	-		Rru_A0873	0.28	-0.0
1,044,141	+		Rru_A0873	0.35	+1.0
1,044,141	+		Rru_A0873	0.35	-0.0
1,044,142	-		Rru_A0873	0.35	-2.6
1,044,142	-		Rru_A0873	0.35	+0.3
1,044,142	-		Rru_A0873	0.35	+0.9
1,044,190	+		Rru_A0873	0.38	+0.1
1,044,190	+		Rru_A0873	0.38	-0.8
1,044,191	-		Rru_A0873	0.38	+0.5
1,044,192	+		Rru_A0873	0.38	-1.0
1,044,249	+		Rru_A0873	0.42	-0.2
1,044,249	+		Rru_A0873	0.42	-0.0
1,044,250	-		Rru_A0873	0.42	+0.3
1,044,250	-		Rru_A0873	0.42	-1.6
1,044,316	-		Rru_A0873	0.46	+0.9
1,044,316	-		Rru_A0873	0.46	-1.0
1,044,483	+		Rru_A0873	0.57	+0.4
1,044,484	-		Rru_A0873	0.57	-0.0
1,044,484	-		Rru_A0873	0.57	+1.0
1,044,484	-		Rru_A0873	0.57	+1.1
1,044,484	-		Rru_A0873	0.57	-0.4
1,044,764	-		Rru_A0873	0.75	-0.0
1,044,998	-				+1.5
1,045,187	+				-0.0
1,045,199	+				+0.3
1,045,200	-				+0.9
1,045,301	-		Rru_A0874	0.38	-1.0
1,045,361	+		Rru_A0874	0.58	-0.0
1,045,361	+		Rru_A0874	0.58	+0.7
1,045,361	+		Rru_A0874	0.58	+0.4
1,045,362	-		Rru_A0874	0.58	+0.2
1,045,444	+		Rru_A0874	0.85	-0.6
1,045,473	+				-0.0
1,045,474	-				-0.1
1,045,508	+				-0.0
1,045,539	+				+0.6
1,045,539	+				-0.0
1,045,539	+				+0.5
1,045,540	-				-0.1
1,045,555	-				-1.0
1,045,555	-				-0.0
1,045,555	-				-1.0
1,046,013	-		Rru_A0876	0.18	+0.6