Strain Fitness in Rhodospirillum rubrum S1H around Rru_A0861

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
1,026,180	+		Rru_A0860	0.63	+0.9
1,026,181	-		Rru_A0860	0.63	-0.0
1,026,181	-		Rru_A0860	0.63	+1.0
1,026,302	-		Rru_A0860	0.71	+0.8
1,026,302	-		Rru_A0860	0.71	+0.1
1,026,303	+		Rru_A0860	0.71	-0.0
1,026,303	+		Rru_A0860	0.71	-0.0
1,026,304	-		Rru_A0860	0.71	-0.0
1,026,304	-		Rru_A0860	0.71	-0.0
1,026,304	-		Rru_A0860	0.71	+0.7
1,026,364	-		Rru_A0860	0.75	-0.2
1,026,530	+		Rru_A0860	0.87	-0.0
1,026,531	-		Rru_A0860	0.87	-0.1
1,026,778	+				+0.7
1,026,784	+				-0.0
1,026,802	+				-0.4
1,026,919	-		Rru_A0861	0.26	-0.3
1,026,919	-		Rru_A0861	0.26	-1.6
1,027,044	+		Rru_A0861	0.53	-0.4
1,027,044	+		Rru_A0861	0.53	+0.5
1,027,045	-		Rru_A0861	0.53	-0.0
1,027,201	+		Rru_A0861	0.86	-0.0
1,027,219	-		Rru_A0861	0.90	-0.4
1,027,219	-		Rru_A0861	0.90	-0.0
1,027,231	+				+0.6
1,027,232	-				+0.5
1,027,233	+				-1.0
1,027,233	+				+2.0
1,027,233	+				-0.0
1,027,233	+				-0.0
1,027,233	+				-0.0
1,027,234	-				-0.0
1,027,234	-				+1.3
1,027,234	-				-0.0
1,027,234	-				-1.6
1,027,234	-				-0.0
1,027,357	+				+0.3
1,027,421	-				-0.0
1,027,444	-				-1.6
1,027,482	-				-0.0
1,027,654	+		Rru_A0862	0.17	+0.4
1,027,654	+		Rru_A0862	0.17	+1.5
1,027,655	-		Rru_A0862	0.17	+0.7
1,027,657	-		Rru_A0862	0.17	+0.5
1,027,657	-		Rru_A0862	0.17	-0.1
1,027,680	+		Rru_A0862	0.19	+1.1
1,027,681	-		Rru_A0862	0.20	+0.2
1,027,681	-		Rru_A0862	0.20	+0.3
1,027,681	-		Rru_A0862	0.20	-0.0
1,027,762	+		Rru_A0862	0.29	-0.0
1,027,762	+		Rru_A0862	0.29	-0.0
1,027,762	+		Rru_A0862	0.29	-0.0
1,027,763	-		Rru_A0862	0.29	-0.0
1,027,763	-		Rru_A0862	0.29	+1.7
1,027,864	+		Rru_A0862	0.40	-0.0
1,027,864	+		Rru_A0862	0.40	+0.7
1,027,864	+		Rru_A0862	0.40	+0.7
1,027,884	+		Rru_A0862	0.42	+3.4
1,028,038	+		Rru_A0862	0.60	-0.0
1,028,038	+		Rru_A0862	0.60	-0.0
1,028,214	+		Rru_A0862	0.80	-0.0
1,028,214	+		Rru_A0862	0.80	+0.5
1,028,215	-		Rru_A0862	0.80	-0.0
1,028,215	-		Rru_A0862	0.80	-1.6
1,028,221	+		Rru_A0862	0.80	-0.0
1,028,221	+		Rru_A0862	0.80	-0.0
1,028,228	+		Rru_A0862	0.81	-0.0
1,028,228	+		Rru_A0862	0.81	+0.2