Strain Fitness in Rhodospirillum rubrum S1H around Rru_A0245
Experiment: acetate; Light intensity 9 uM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | acetate; Light intensity 9 uM |
|---|---|---|---|---|---|
| remove | |||||
| 304,512 | - | +0.0 | |||
| 304,662 | + | +0.0 | |||
| 304,663 | - | +0.1 | |||
| 304,663 | - | +0.7 | |||
| 305,520 | + | +1.6 | |||
| 305,521 | - | +0.0 | |||
| 305,521 | - | -0.4 | |||
| 305,521 | - | +0.0 | |||
| 305,718 | + | Rru_A0246 | 0.22 | +0.0 | |
| 305,718 | + | Rru_A0246 | 0.22 | -0.5 | |
| 305,718 | + | Rru_A0246 | 0.22 | +0.0 | |
| 305,719 | - | Rru_A0246 | 0.23 | +1.7 | |
| 305,751 | + | Rru_A0246 | 0.25 | -0.3 | |
| 305,751 | + | Rru_A0246 | 0.25 | +3.0 | |
| 306,087 | + | Rru_A0246 | 0.53 | -2.0 | |
| 306,087 | + | Rru_A0246 | 0.53 | -1.0 | |
| 306,087 | + | Rru_A0246 | 0.53 | -0.6 | |
| 306,088 | - | Rru_A0246 | 0.53 | +0.0 | |
| 306,088 | - | Rru_A0246 | 0.53 | +1.6 | |
| 306,273 | + | Rru_A0246 | 0.69 | +0.0 |
Or see this region's nucleotide sequence