Strain Fitness in Rhodospirillum rubrum S1H around Rru_A0048

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
49,722	+		Rru_A0047	0.59	+0.0
49,723	-		Rru_A0047	0.59	-0.1
49,734	+		Rru_A0047	0.60	+1.1
49,734	+		Rru_A0047	0.60	-1.0
49,837	+		Rru_A0047	0.66	+0.6
49,837	+		Rru_A0047	0.66	+0.9
49,837	+		Rru_A0047	0.66	+1.0
49,838	-		Rru_A0047	0.66	+0.8
49,838	-		Rru_A0047	0.66	+0.5
49,838	-		Rru_A0047	0.66	+1.0
49,838	-		Rru_A0047	0.66	+0.0
49,876	+		Rru_A0047	0.69	-0.1
49,876	+		Rru_A0047	0.69	+0.0
49,877	-		Rru_A0047	0.69	+0.0
49,877	-		Rru_A0047	0.69	+0.6
49,877	-		Rru_A0047	0.69	-0.8
49,877	-		Rru_A0047	0.69	-0.2
50,300	-				-1.6
50,478	-				-1.0
50,478	-				+0.0
50,521	+				-0.1
50,522	-				+0.0
50,522	-				+0.3
50,522	-				+0.5
50,614	+		Rru_A0048	0.15	+0.0
50,615	-		Rru_A0048	0.15	-1.0
50,615	-		Rru_A0048	0.15	+0.0
50,654	-		Rru_A0048	0.21	+0.5
50,964	+		Rru_A0048	0.71	+0.0
50,965	-		Rru_A0048	0.71	+0.3
50,965	-		Rru_A0048	0.71	+0.4
51,077	+		Rru_A0048	0.89	+0.0
51,077	+		Rru_A0048	0.89	+0.5
51,077	+		Rru_A0048	0.89	+0.0
51,077	+		Rru_A0048	0.89	-1.0
51,077	+		Rru_A0048	0.89	+0.8
51,077	+		Rru_A0048	0.89	+0.2
51,078	-		Rru_A0048	0.89	+0.0
51,078	-		Rru_A0048	0.89	+0.4
51,646	+				+0.0
51,754	+		Rru_A0050	0.31	+0.0
51,755	-		Rru_A0050	0.32	-0.5
51,755	-		Rru_A0050	0.32	+0.0
51,781	+		Rru_A0050	0.38	+0.0
51,781	+		Rru_A0050	0.38	+0.0
51,781	+		Rru_A0050	0.38	+0.7
51,782	-		Rru_A0050	0.38	-0.1
51,786	+		Rru_A0050	0.39	+0.0
52,047	+				-1.6
52,047	+				+0.6
52,047	+				+0.0
52,047	+				+0.4